PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714799.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 740aa MW: 85465.4 Da PI: 5.1444

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.6	1.6e-21	131	214	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH + XP_022714799.1 131 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEAN-----SRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 214 69**************************************99888.....8999*****************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MTGDATFSSS DHQALSPSPN LDITIEEGSQ NSEQLFEDDG HELEMEGNGL EIEGNDVDIE 60 SNGLEIEGNG LDIESNGLQN DCDQMLEIED NHESNRDDTT AVAVENGISQ GKDYPPPVVG 120 MEFESYDDAY NYYNCYAKEL GFAIRVKSSW TKRNSKEKRG AVLCCNCEGF KTIKEANSRR 180 KETRTGCLAM IRLRLVESNR WRVDEVKLEH NHLFDHERAQ NCKSHKKMDT VAKRKVEPTV 240 DVEVQTIKLY RTPVVDPVGY GSSNSLEAES SQNVDRSKRL KLKKGDYQII CNYFSRIQLT 300 NPNFVYLMDV NDEGYLRNVF WIESRSRAAY GYFGDVVAVD TTCLSNKYEI SLVAFVGVNH 360 HGQSILLGCG LLVDDTFETY VWLFRAWLTC MSGRPPQTII TDQCRAMQGA ISEVFPRAHH 420 RLHLSHVMRS ILENLGELQE SGVFQMILNR TVYNSLKVDE FEMGWDDMIR RFGIADQAWL 480 RTLYEERERW APVYLKDTFF AGMCTFQNGE SMSSYFDGYV HKQTTLKEFF EMYELILQKK 540 HKKEALDDLE SRDSSPMLKT RCYYELQLSK LYTNEIFRRF QDEVVLMPSC FGVTQVHASG 600 PVATYLIKEH EGEGDQRDIR TFEVMYDKAG MEIRCICGCF NFNGYLCRHG LCILNYNGLD 660 EIPFHYILSR WRKDFKRLYI PDLGSNNVDV SNPVQWFDHL YRRSMQVVEE GMISQDHYMV 720 AWQAFKESLN KVRLVADKHV

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MTGDATFSSS DHQALSPSPN LDITIEEGSQ NSEQLFEDDG HELEMEGNGL EIEGNDVDIE  60
SNGLEIEGNG LDIESNGLQN DCDQMLEIED NHESNRDDTT AVAVENGISQ GKDYPPPVVG  120
MEFESYDDAY NYYNCYAKEL GFAIRVKSSW TKRNSKEKRG AVLCCNCEGF KTIKEANSRR  180
KETRTGCLAM IRLRLVESNR WRVDEVKLEH NHLFDHERAQ NCKSHKKMDT VAKRKVEPTV  240
DVEVQTIKLY RTPVVDPVGY GSSNSLEAES SQNVDRSKRL KLKKGDYQII CNYFSRIQLT  300
NPNFVYLMDV NDEGYLRNVF WIESRSRAAY GYFGDVVAVD TTCLSNKYEI SLVAFVGVNH  360
HGQSILLGCG LLVDDTFETY VWLFRAWLTC MSGRPPQTII TDQCRAMQGA ISEVFPRAHH  420
RLHLSHVMRS ILENLGELQE SGVFQMILNR TVYNSLKVDE FEMGWDDMIR RFGIADQAWL  480
RTLYEERERW APVYLKDTFF AGMCTFQNGE SMSSYFDGYV HKQTTLKEFF EMYELILQKK  540
HKKEALDDLE SRDSSPMLKT RCYYELQLSK LYTNEIFRRF QDEVVLMPSC FGVTQVHASG  600
PVATYLIKEH EGEGDQRDIR TFEVMYDKAG MEIRCICGCF NFNGYLCRHG LCILNYNGLD  660
EIPFHYILSR WRKDFKRLYI PDLGSNNVDV SNPVQWFDHL YRRSMQVVEE GMISQDHYMV  720
AWQAFKESLN KVRLVADKHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein