PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714707.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 339aa MW: 37947.9 Da PI: 7.2879

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.7	1.8e-15	43	102	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022714707.1 43 SIYRGVTRHRWTGRFEAHLWDkNCWNEsqsKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 102 57*****************999977777557***********************98 PP
2	AP2	41.2	4.1e-13	134	179	7	55
AP2 7 rwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r+++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022714707.1 134 RRHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 179 89999*****99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MAKISQQTQK NSSTTASNIA KPTTKVKRTR KTVPRDSPPQ RSSIYRGVTR HRWTGRFEAH 60 LWDKNCWNES QSKKGRQVYL GAYDDEEAAA HAYDLAALKY WGQDTILNFP LSTYQNELKE 120 MECQSKEEYI GSLRRHHHNG RWEARIGRVF GNKYLYLGTY ATQEEAATAY DMAAIEYRGL 180 NAVTNFDLSR YIKWLRPNHQ SNLNNSESPL QNLNGDTNST QSPKHGIGLG FSIQPKSCST 240 SDTSVTPPPH GCNGGGGSAS SALGLLLQSS KFEEMLERTS AADSPSTPSE PGLPRRSFPD 300 DIQTYFECQD SSSYTESDII FGDLINSFST PMFHCELDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-88	AP2 family protein