PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714706.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 356aa MW: 39772 Da PI: 8.5312

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.6	2e-15	43	102	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022714706.1 43 SIYRGVTRHRWTGRFEAHLWDkNCWNEsqsKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 102 57*****************999977777557***********************98 PP
2	AP2	51.2	3e-16	145	196	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022714706.1 145 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 196 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MAKISQQTQK NSSTTASNIA KPTTKVKRTR KTVPRDSPPQ RSSIYRGVTR HRWTGRFEAH 60 LWDKNCWNES QSKKGRQVYL GAYDDEEAAA HAYDLAALKY WGQDTILNFP LSTYQNELKE 120 MECQSKEEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ 180 EEAATAYDMA AIEYRGLNAV TNFDLSRYIK WLRPNHQSNL NNSESPLQNL NGDTNSTQSP 240 KHGIGLGFSI QPKSCSTSDT SVTPPPHGCN GGGGSASSAL GLLLQSSKFE EMLERTSAAD 300 SPSTPSEPGL PRRSFPDDIQ TYFECQDSSS YTESDIIFGD LINSFSTPMF HCELDG

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MAKISQQTQK NSSTTASNIA KPTTKVKRTR KTVPRDSPPQ RSSIYRGVTR HRWTGRFEAH  60
LWDKNCWNES QSKKGRQVYL GAYDDEEAAA HAYDLAALKY WGQDTILNFP LSTYQNELKE  120
MECQSKEEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ  180
EEAATAYDMA AIEYRGLNAV TNFDLSRYIK WLRPNHQSNL NNSESPLQNL NGDTNSTQSP  240
KHGIGLGFSI QPKSCSTSDT SVTPPPHGCN GGGGSASSAL GLLLQSSKFE EMLERTSAAD  300
SPSTPSEPGL PRRSFPDDIQ TYFECQDSSS YTESDIIFGD LINSFSTPMF HCELDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-105	AP2 family protein