PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714422.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TALE

Protein Properties

Length: 352aa MW: 39853.9 Da PI: 6.4107

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	280	314	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_022714422.1 280 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 314 569*****************************885 PP
2	ELK	41.2	3.5e-14	234	255	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ XP_022714422.1 234 ELKGQLLRKYSGYLGSLKQEFM 255 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MEGGSNSTSC MMAFGHNSNG LCPMTIMHPM TSHPHHQHHH DPNLDSNSLF LPLPPTNNQD 60 HNHNSSIGSS MIFDDHNSYT NNNTGCYFMA SNDGSSSSVK AKIMAHPHYH RLLAAYVNCQ 120 KVGAPPEVMA RLEEACASAA TMGPTSTCCI GEDPALDQFM EAYCEMLTKY EQELSKPYNE 180 AMLFLQRVEC QFKALTVSSP NVGACVEAID RNGSSEEEVE VNNDFIDPLA EDRELKGQLL 240 RKYSGYLGSL KQEFMKKRKK GKLPKEARQQ LLDWWSRHYK WPYPSESQKL ALAESTGLDQ 300 KQINNWFINQ RKRHWKPSED MQFVVMDATH PHYYMDNVLG NPFPMDLSPT LL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MEGGSNSTSC MMAFGHNSNG LCPMTIMHPM TSHPHHQHHH DPNLDSNSLF LPLPPTNNQD  60
HNHNSSIGSS MIFDDHNSYT NNNTGCYFMA SNDGSSSSVK AKIMAHPHYH RLLAAYVNCQ  120
KVGAPPEVMA RLEEACASAA TMGPTSTCCI GEDPALDQFM EAYCEMLTKY EQELSKPYNE  180
AMLFLQRVEC QFKALTVSSP NVGACVEAID RNGSSEEEVE VNNDFIDPLA EDRELKGQLL  240
RKYSGYLGSL KQEFMKKRKK GKLPKEARQQ LLDWWSRHYK WPYPSESQKL ALAESTGLDQ  300
KQINNWFINQ RKRHWKPSED MQFVVMDATH PHYYMDNVLG NPFPMDLSPT LL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	259	LKQEFMKKRK
2	256	260	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-136	TALE family protein