PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714417.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 408aa MW: 46895.4 Da PI: 8.4267

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	153	176	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++ +Lk+H + H XP_022714417.1 153 YICGVCGRKCKTNLDLKKHFKQlH 176 89*****************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MNPLCNSLKS LYLQPSPIHS KPDLFFSHSL SPTFTTPFKT KYPPRKCHLT VKSNANAVEI 60 DLVRNKQGVY APKQEKVVIL WDLDNKPPRG PPYEAALALK KMAENFGEVV DMSAYANRHA 120 FIHLPPWVLQ ERRERKSLDI LERKGIVTPS ELYICGVCGR KCKTNLDLKK HFKQLHERER 180 QKKLNRMKSL KGKKRQRFKE RYISGNHKYN EAARSLVTPK VGYGLARELR RAGVYVKTVE 240 DKPQAADWAL KRQMQHSMSR GIDWLFLVSD DKDFVDMLKR AKEANLGTVV VGDWNRALGR 300 HADLWVSWIG VENGEVTEKD LVPKRRRKRS EDDGLFSVSE FDGGSVGELD GVVNDLVVER 360 TEFGGVRISL FSEGEEDEDE WEIEGVGDVN YFLDDSEDEV FFEEDGYY

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MNPLCNSLKS LYLQPSPIHS KPDLFFSHSL SPTFTTPFKT KYPPRKCHLT VKSNANAVEI  60
DLVRNKQGVY APKQEKVVIL WDLDNKPPRG PPYEAALALK KMAENFGEVV DMSAYANRHA  120
FIHLPPWVLQ ERRERKSLDI LERKGIVTPS ELYICGVCGR KCKTNLDLKK HFKQLHERER  180
QKKLNRMKSL KGKKRQRFKE RYISGNHKYN EAARSLVTPK VGYGLARELR RAGVYVKTVE  240
DKPQAADWAL KRQMQHSMSR GIDWLFLVSD DKDFVDMLKR AKEANLGTVV VGDWNRALGR  300
HADLWVSWIG VENGEVTEKD LVPKRRRKRS EDDGLFSVSE FDGGSVGELD GVVNDLVVER  360
TEFGGVRISL FSEGEEDEDE WEIEGVGDVN YFLDDSEDEV FFEEDGYY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	173	RRERKSLDILERKGIVTPSELYICGVCGRKCKTNLDLKKHFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-172	C2H2 family protein