PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr21950.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 2257aa MW: 250214 Da PI: 5.7628

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr21950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.1	3.4e-27	190	244	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+ LH+ Fv+av+ LGG++ AtPk+il lm+v+g+t+ +vkSHLQkYRl Dr21950.1 190 KTRMRWTQPLHDLFVQAVADLGGPDSATPKSILILMGVEGITMCQVKSHLQKYRL 244 68****************************************************8 PP
2	Myb_DNA-binding	40.4	6.6e-13	192	243	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+ +++l+v+av+ lGg+ t+k+I mg +g t q+ks++qky+ Dr21950.1 192 RMRWTQPLHDLFVQAVADLGGPdsaTPKSILILMGvEGITMCQVKSHLQKYR 243 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 2257 aa Download sequence
MIMAHSSNYF PVPTAWQDDA LESNEHAGNP SRDSLNYHLA ALSLDFPASP FZEQHQLDHD 60 THAVLPQFDV VNEFDLEFQE DVSVNDFDLQ PAMDNNVSIS VDDFAVEPAM DNNVDISVHD 120 FDVEPAMDNN XDISVDDFDV EPAIDHVIAN SGASCSDVNP FKTQTCSVGL QPHPSLEEQP 180 KLSGSEFTNK TRMRWTQPLH DLFVQAVADL GGPDSATPKS ILILMGVEGI TMCQVKSHLQ 240 KYRLARLEAQ FQEAQRTSCS EGKKKTLTEK YYNGHNKLLS CDQVLRELQI QTEENGRRLQ 300 EFIENQREAF MMITKSISXS RVAGETSSVN LEHNTVDDVI YVDSDSDTED SFPSYKRPSX 360 RYTISSQTDG CHVANIPLKD SNGFKWTLDN WTHPTEGKGK GPPKSCLRGI VEEMEPDLSS 420 PVVLDASIRR IKFSLATAGE IHQYSINDSP VSHPSQLTNP FLGLPLESGK CESCGTAEHG 480 QCEGHFGYIP LITPIYHPCH ITELRNILSL ICLKCMRVKK GKDIPPISIT EVKTTDGAFC 540 LELKVRSKSR LREGFWHFLD KFGFRYGDTF CRPLLPYEAL KILKEVPEET RKRLAGKGFF 600 PQEGFILQYL PVPPNCLYVP EISDGKSIMS SDISIPLLKR VLNKNELIKR SRSGVPNFES 660 HEVESNDLQS SIAQYMHLRG TTKAPQITQN KFSVGSDPEC SGKRWLEKMK TLFISKGSGF 720 SSRSVICGDP YIAVGEIGLP IEVAKKITFE ERVNKYNITR LQQIVDNRLC VTYRDGLSTY 780 AISVGSKGHT SLKVGQIINR RIMDGDIVFI NRPPSTHKHS LQAFSVFIHE DNTVKINPLV 840 CAPFGADFDG DCIHIFYPQS LAAKAEVQEL FSVDKQLLSS HSGNLNLPLI QDSLLSLKLM 900 FNRIYLRKST AQQLAMFVSS VLPPPSLLKA HNNGPFWTVT QILQCALPSC FDSSGMRHLI 960 RNSEILEFDF DKDLLQTVLE SILISIVDKS PKDALCFLNH IQPLLMETLS LEGYSLDLRD 1020 FDVPMDVVKD LEKRAQEISK VLDQLRWTYN ELVDKQVEDH IKIIKLPIVN FIGXSSALGQ 1080 LVDSKSDSSI QKVVEQIGLL GVQISDRGKL YSKGLVEDLF VHFVNKYSAD KADHPSEAYG 1140 LIKSSFFRGL NPFEELVHSI ASREVIVRSS RGLTEPGTLF KNLMAILRDV IVCYDGTVRN 1200 ICSNSIVQFD YGLSEEFSTI SPAGEPVGVL AATAISNPAY KAVLDSSRST NSSWELMKEI 1260 LLCKASFKNG TIDRRVILYL NDCRCGKKFC KENAAFSVQS TLKRVALKDC AIEFLIEYQK 1320 HIVLDNNXEP VSGLVGHIHL DQTRLNVLSQ SLDVILRKCQ DVVFSYAKKK GHLSHYFRKI 1380 SLSSSCLSGH DHILGWIMWK GAFCFXSECC SFQHTNHENF SEFPCLQFSY CDPNPNSLPL 1440 EKAIHVLAEA ICPILLDTII KGDPRVHVAN IVWIGHDTYS WVKNSRSTLK GELAIEVVIE 1500 QDAARRNGDA WRIVLDACLP VMHLIDTSRS IPYGIQQIEE LLGISCAFDQ SVRRLSTSIR 1560 MVAKGVFKEH LILVANNMTC TGSLIGFSTG GFKALFRSLK VQAPFTEATL YTPMKCFERA 1620 SEKLHTDTLS SIVSSCSWGR HVALGTGASF DIIWDKHQVV ADRDCGENVY DFLEMVRTTT 1680 CEEVGGTFFG VEVDNLADQD EGDECLSPEP DGALAQPTFD DISELDLNNE RASKSSWDNA 1740 SGSLSWDNLG AQKHTQISNE SDAWGTWQSK DDGRASAKEP ANEAWVSTKQ FTLDXVQDGC 1800 GSVKESIWDG SQDGHGPAKE SAEDGWGSTR KXAQNSWGSG KETAQDGWGS TKISAIDDRG 1860 SAKQPAQDGI GSAAKSSQDD WGSAKKSVQN EWGSATKPPQ DNWGSSKKPA QNDWGSSKKP 1920 AQNDWGSLKK PAQDNWGSMK KSAQKEWGSV KESSQDEWGS IKKPAQDEGG SFKKSAQDDW 1980 GSAENSSQGD WGSAKDTTQD DWGSVRVSSK KPAQGNWDSA KKPAEDDLGS AKEPSVYSSP 2040 SQDGWVTDKK PAQGDWGAGK NPAQDDWGSA KEPLKDGWVT DKKPAQGDWG AGKNPAQDDW 2100 GSAKEPSKDG WASGKVPAMD NAQDGWASAK ESAQDGWGSA GQNGRGSRAK VGWGSSNATE 2160 PKNQKNHSTR FDDRKGWNAN RSFNSAGRRP DFFTCEEEKI LVEVEPTMQR IRKILHDSRL 2220 ISTRTFKIPG LCAEIPGITS PQIRSKIEGQ VSLYSAP

Sequence ? help Back to Top

Protein Sequence Length: 2257 aa Download sequence

MIMAHSSNYF PVPTAWQDDA LESNEHAGNP SRDSLNYHLA ALSLDFPASP FZEQHQLDHD  60
THAVLPQFDV VNEFDLEFQE DVSVNDFDLQ PAMDNNVSIS VDDFAVEPAM DNNVDISVHD  120
FDVEPAMDNN XDISVDDFDV EPAIDHVIAN SGASCSDVNP FKTQTCSVGL QPHPSLEEQP  180
KLSGSEFTNK TRMRWTQPLH DLFVQAVADL GGPDSATPKS ILILMGVEGI TMCQVKSHLQ  240
KYRLARLEAQ FQEAQRTSCS EGKKKTLTEK YYNGHNKLLS CDQVLRELQI QTEENGRRLQ  300
EFIENQREAF MMITKSISXS RVAGETSSVN LEHNTVDDVI YVDSDSDTED SFPSYKRPSX  360
RYTISSQTDG CHVANIPLKD SNGFKWTLDN WTHPTEGKGK GPPKSCLRGI VEEMEPDLSS  420
PVVLDASIRR IKFSLATAGE IHQYSINDSP VSHPSQLTNP FLGLPLESGK CESCGTAEHG  480
QCEGHFGYIP LITPIYHPCH ITELRNILSL ICLKCMRVKK GKDIPPISIT EVKTTDGAFC  540
LELKVRSKSR LREGFWHFLD KFGFRYGDTF CRPLLPYEAL KILKEVPEET RKRLAGKGFF  600
PQEGFILQYL PVPPNCLYVP EISDGKSIMS SDISIPLLKR VLNKNELIKR SRSGVPNFES  660
HEVESNDLQS SIAQYMHLRG TTKAPQITQN KFSVGSDPEC SGKRWLEKMK TLFISKGSGF  720
SSRSVICGDP YIAVGEIGLP IEVAKKITFE ERVNKYNITR LQQIVDNRLC VTYRDGLSTY  780
AISVGSKGHT SLKVGQIINR RIMDGDIVFI NRPPSTHKHS LQAFSVFIHE DNTVKINPLV  840
CAPFGADFDG DCIHIFYPQS LAAKAEVQEL FSVDKQLLSS HSGNLNLPLI QDSLLSLKLM  900
FNRIYLRKST AQQLAMFVSS VLPPPSLLKA HNNGPFWTVT QILQCALPSC FDSSGMRHLI  960
RNSEILEFDF DKDLLQTVLE SILISIVDKS PKDALCFLNH IQPLLMETLS LEGYSLDLRD  1020
FDVPMDVVKD LEKRAQEISK VLDQLRWTYN ELVDKQVEDH IKIIKLPIVN FIGXSSALGQ  1080
LVDSKSDSSI QKVVEQIGLL GVQISDRGKL YSKGLVEDLF VHFVNKYSAD KADHPSEAYG  1140
LIKSSFFRGL NPFEELVHSI ASREVIVRSS RGLTEPGTLF KNLMAILRDV IVCYDGTVRN  1200
ICSNSIVQFD YGLSEEFSTI SPAGEPVGVL AATAISNPAY KAVLDSSRST NSSWELMKEI  1260
LLCKASFKNG TIDRRVILYL NDCRCGKKFC KENAAFSVQS TLKRVALKDC AIEFLIEYQK  1320
HIVLDNNXEP VSGLVGHIHL DQTRLNVLSQ SLDVILRKCQ DVVFSYAKKK GHLSHYFRKI  1380
SLSSSCLSGH DHILGWIMWK GAFCFXSECC SFQHTNHENF SEFPCLQFSY CDPNPNSLPL  1440
EKAIHVLAEA ICPILLDTII KGDPRVHVAN IVWIGHDTYS WVKNSRSTLK GELAIEVVIE  1500
QDAARRNGDA WRIVLDACLP VMHLIDTSRS IPYGIQQIEE LLGISCAFDQ SVRRLSTSIR  1560
MVAKGVFKEH LILVANNMTC TGSLIGFSTG GFKALFRSLK VQAPFTEATL YTPMKCFERA  1620
SEKLHTDTLS SIVSSCSWGR HVALGTGASF DIIWDKHQVV ADRDCGENVY DFLEMVRTTT  1680
CEEVGGTFFG VEVDNLADQD EGDECLSPEP DGALAQPTFD DISELDLNNE RASKSSWDNA  1740
SGSLSWDNLG AQKHTQISNE SDAWGTWQSK DDGRASAKEP ANEAWVSTKQ FTLDXVQDGC  1800
GSVKESIWDG SQDGHGPAKE SAEDGWGSTR KXAQNSWGSG KETAQDGWGS TKISAIDDRG  1860
SAKQPAQDGI GSAAKSSQDD WGSAKKSVQN EWGSATKPPQ DNWGSSKKPA QNDWGSSKKP  1920
AQNDWGSLKK PAQDNWGSMK KSAQKEWGSV KESSQDEWGS IKKPAQDEGG SFKKSAQDDW  1980
GSAENSSQGD WGSAKDTTQD DWGSVRVSSK KPAQGNWDSA KKPAEDDLGS AKEPSVYSSP  2040
SQDGWVTDKK PAQGDWGAGK NPAQDDWGSA KEPLKDGWVT DKKPAQGDWG AGKNPAQDDW  2100
GSAKEPSKDG WASGKVPAMD NAQDGWASAK ESAQDGWGSA GQNGRGSRAK VGWGSSNATE  2160
PKNQKNHSTR FDDRKGWNAN RSFNSAGRRP DFFTCEEEKI LVEVEPTMQR IRKILHDSRL  2220
ISTRTFKIPG LCAEIPGITS PQIRSKIEGQ VSLYSAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	2e-24	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr21950.1