PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr21036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | FAR1 | ||||||||
Protein Properties | Length: 214aa MW: 24699 Da PI: 9.7739 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75 | 1.5e-23 | 42 | 130 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +Y +YAk+ GF vrk + ++s+ ++ it+r+fvC keg ++ ++k+ k+ ++r trt+ +a++ v+k+k+g+w +++++ HnH l Dr21036.1 42 YYLDYAKSKGFGVRKGHVYRSSSSQVITCRHFVCDKEGAKSMSDKRqLGKTVQRRRDTRTNYQARMIVSKMKSGRWTIKTFDDVHNHVL 130 8**************************************999888756788999*********************************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MHELTTQDDQ EMAMSPQSQD ERDVRIPFVG MEFEDEDAAF RYYLDYAKSK GFGVRKGHVY 60 RSSSSQVITC RHFVCDKEGA KSMSDKRQLG KTVQRRRDTR TNYQARMIVS KMKSGRWTIK 120 TFDDVHNHVL LITPSKIFFS FSFSPEVVIT SGVSTLLQIK AIKIMNWSWS VRSDPVVTSM 180 PVAAAARERE SKIFSGVGSG MEEERGREQR WDRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 7e-17 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr21036.1 |