PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr20787.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 773aa MW: 85031.9 Da PI: 7.3237

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr20787.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.7e-09	561	598	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Dr20787.1 561 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 598 664459******************************88 PP
2	BELL	124.6	3.8e-40	422	492	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e q+kkakLls+l+eVd+rY++y++q+q+v++sF+av+g g+a+pYt+lA+ka+SrhFrcLkdaia q+ Dr20787.1 422 RFEQQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGFGAATPYTALAQKAMSRHFRCLKDAIAVQL 492 6799****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MGIARPASHP TCCSLLCPTK PDNGFSSLSS MSQGFHQGIF SFSDGFDRSG SQDQQQQQHH 60 IAQQSRREKL RVPHGFDPAG HPLVTPLEEG EDPAIYETTG AGNMLSEMFN FPTQAPSATE 120 LLANQIPANF RLPQRQATIS GFAGDWYGAT RQGMVMGSSS SVNPLGDTTP KHPHDSSQQS 180 QQQQQQQQHA LPGLNADSAA AMQLFLMSPP TGQAQHTRSP SPPPPAPQQA LHHHHTFQTA 240 SFGETSFGRG IVEGQGLSLS LASNLQQFEM AKAEELRMRD GVLYFNNQQQ QQQQPQSQQQ 300 QQQQQQQQQS HHQHHHTSSL HLQSHGQASG HGHGQQVHMG YGPMGVVNVL RSSKYARPAQ 360 ELLEEFCSVG RGQLKGSRIG RHHHASSNPN NPSSSAGAAV AGAGASSSSS KDVPPPLSPA 420 DRFEQQRKKA KLLSMLDEVD RRYNHYCDQM QMVVNSFDAV MGFGAATPYT ALAQKAMSRH 480 FRCLKDAIAV QLKQTCELLG EKDGGGTSGI TKGETPRLKL LDQSLRQQRA FHQMGMMEQE 540 AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN WFINARVRLW 600 KPMVEEMYQQ EYKEEGEGRE QGEGSHQTAQ SPTQQHQQQQ QQQQQQQQQQ HQHQHQRAEN 660 NAPENDSSLG PTSISMHQRN AASASAMSHQ SSTDDAILAA TEPFVGPDPH VGGPGDDVFR 720 MADYGVASAL GPSATRMRFG TAGDVSLTLG LRHTSNTSSA PETNRFSIRD FGA

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MGIARPASHP TCCSLLCPTK PDNGFSSLSS MSQGFHQGIF SFSDGFDRSG SQDQQQQQHH  60
IAQQSRREKL RVPHGFDPAG HPLVTPLEEG EDPAIYETTG AGNMLSEMFN FPTQAPSATE  120
LLANQIPANF RLPQRQATIS GFAGDWYGAT RQGMVMGSSS SVNPLGDTTP KHPHDSSQQS  180
QQQQQQQQHA LPGLNADSAA AMQLFLMSPP TGQAQHTRSP SPPPPAPQQA LHHHHTFQTA  240
SFGETSFGRG IVEGQGLSLS LASNLQQFEM AKAEELRMRD GVLYFNNQQQ QQQQPQSQQQ  300
QQQQQQQQQS HHQHHHTSSL HLQSHGQASG HGHGQQVHMG YGPMGVVNVL RSSKYARPAQ  360
ELLEEFCSVG RGQLKGSRIG RHHHASSNPN NPSSSAGAAV AGAGASSSSS KDVPPPLSPA  420
DRFEQQRKKA KLLSMLDEVD RRYNHYCDQM QMVVNSFDAV MGFGAATPYT ALAQKAMSRH  480
FRCLKDAIAV QLKQTCELLG EKDGGGTSGI TKGETPRLKL LDQSLRQQRA FHQMGMMEQE  540
AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN WFINARVRLW  600
KPMVEEMYQQ EYKEEGEGRE QGEGSHQTAQ SPTQQHQQQQ QQQQQQQQQQ HQHQHQRAEN  660
NAPENDSSLG PTSISMHQRN AASASAMSHQ SSTDDAILAA TEPFVGPDPH VGGPGDDVFR  720
MADYGVASAL GPSATRMRFG TAGDVSLTLG LRHTSNTSSA PETNRFSIRD FGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-132	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr20787.1