PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20407.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 396aa    MW: 43962.1 Da    PI: 6.5398
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20407.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32e-30162221159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+aed+ ++++tYeg+Hnh+
  Dr20407.1 162 MNDGCQWRKYGQKXAKGNPCPRAYYRCTVApACPVRKQVQRCAEDKAILITTYEGTHNHP 221
                58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MEMKLDEDVS KLSKLESTKV EMLEMQKENE KLKMILGRIA EDYRGLQMRF FDAFQQEQVK  60
NNGEQIPVIA LKQVEEKEVE KEPFELVSLR LGTSSSFQKK EEKIIRNDDK KEECLTLGLG  120
ETLSMNSENN TFEDAKQDEV SQQPLVKKPR VSVRARCDAP TMNDGCQWRK YGQKXAKGNP  180
CPRAYYRCTV APACPVRKQV QRCAEDKAIL ITTYEGTHNH PLPITATAMA STTSAAAGML  240
MSGSSNTTTS STAFNFPDNS KPITLDLTSP QALQLNSYYY SSPSSSNLNF SSSYMQRSNN  300
AMTDSIAKAI TSDPSFRSVV AAAISSYIGA GDQSLCLAQD XNGFSAPKLL SKFNDASFNA  360
QQGKNLMMYQ QPPLLPFSDS KTTSAFSPLE TRENIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-50WRKY family protein