PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr20180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 20887.6 Da PI: 4.9001 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 12 | 61 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr+++ +g+Wv+eIr p++ r r++lg+++ +e+Aa+a +aa+ +l+g Dr20180.1 12 RFKGVRRRR-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAAYCLRG 61 69****777.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MTRLAESSED VRFKGVRRRR WGKWVSEIRL PNSRERIWLG SYDAPEKAAR AFDAAAYCLR 60 GRRAXLNFPE NPPCISSPKS LTHQQIRLAA ARHANAIPVG XAAAGTSAAE SSSANSLTPL 120 PEQPLPHSES DASDGLTPES EQGGLEPEPV DWSAVGFPDI DDLNYYHPIV QEPPPPDSDE 180 NGLSYNLWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr20180.1 |