PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20129.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family G2-like
Protein Properties Length: 331aa    MW: 36073.3 Da    PI: 5.6518
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20129.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.11.1e-29160213155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +prl+Wtp+LH+rFv++v++L G++ A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Dr20129.1 160 RPRLVWTPQLHKRFVDVVAHL-GIKSAVPKTIMQLMNVEGLTRENVASHLQKYRL 213
                59*******************.********************************8 PP
2Myb_DNA-binding48.32.4e-15162212148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
        Dr20129.1 162 RLVWTPQLHKRFVDVVAHLGIKsaVPKTIMQLMNvEGLTRENVASHLQKYR 212
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MGEEADHIDC DLLMDGCGDG DEGKVLEWEI GLPSADDLTP LSQGLITPEL ASAFSITPEP  60
CRTILDVIRA SQSTMSSLQR NSTSSSSSTS VLKSFAPFPS SDAHDQMVLD GDDPVNSKDG  120
ETEPSQKARR MDSTVMEDGD SSAIRQDNSI DEHSARTLKR PRLVWTPQLH KRFVDVVAHL  180
GIKSAVPKTI MQLMNVEGLT RENVASHLQK YRLYLKRMQG LSNEGPSSSD HLFASTPVPQ  240
SLREQQPVPV PVPMPMPYAV PTMFPMPYGM QHAHHQGHNP VAMVPVNNHH GGGAYQGFDH  300
YGAFGDRGKD CSGGNNFGNI VSYPHATTND K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-73G2-like family protein