PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr19715.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 263aa    MW: 30758.9 Da    PI: 9.8656
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr19715.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.74.2e-11133179147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g+WT+ Ed  l++++ ++G g+ k + r  g+  ++k+c++rw ++
        Dr19715.1 133 KGPWTATEDAVLAEYIYEHGEGNLKXVQRNSGLPHCGKSCRLRWVNH 179
                      79******************************889*********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MYVMNFRPNT KKRCKAFYKK GCPFYLWASP MVDDKDTIQI KSXVLEHECA RDHTTRHVNA  60
DCIAKNYLDQ FRADHNWNIV GIVQAIKMNQ AVHINRLKTY RGKCIALRER GRGIKEKRRG  120
QEGGEEGDKG LKKGPWTATE DAVLAEYIYE HGEGNLKXVQ RNSGLPHCGK SCRLRWVNHF  180
HPNLKKVVFS PEEELLILCL HAQLXNKWAQ MAAYVLLLFL LLILLHLHYG NQSSYLFVLI  240
WLQLPGRTDD EINNYWNTRI KRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.12e-41MYB family protein