PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr18691.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

HSF

Protein Properties

Length: 437aa MW: 49354.9 Da PI: 6.4121

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr18691.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	90.6	1.8e-28	63	183	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT....................XTTS CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks....................keki 78 Fl+k y+i++d++++ ++sw +ng+sfv++d+++f++++LpkyFkhsn++SFvRQLn+Y + +e+ k+ +++ Dr18691.1 63 FLSKCYDIVDDSATDGTVSWGKNGDSFVIWDSHTFSRELLPKYFKHSNLSSFVRQLNTYMAGEDVGTETVAKEvrvkewgaagrperqgfhkaDHDR 159 9*********************************************************7655444444434467888999998888777654499 PP EEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 79 weFkhksFkkgkkellekikrkks 102 eF++ksF k++k+ll+ i r+k Dr18691.1 160 LEFANKSFIKDQKHLLKMIIRRKP 183 ******************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MMWKHESCCS MVDDIKGQRI KSPALRLLFH FHLGLGLGLG LGFMGGVRMV NDKGELLAMA 60 PPFLSKCYDI VDDSATDGTV SWGKNGDSFV IWDSHTFSRE LLPKYFKHSN LSSFVRQLNT 120 YMAGEDVGTE TVAKEVRVKE WGAAGRPERQ GFHKADHDRL EFANKSFIKD QKHLLKMIIR 180 RKPGHDHPQL QQSEAKGANV NACVEVGKFG LAEEVERLKR DKDLLRQELI KLRQHQQTTE 240 NQVHDLRQSL HGMEQNQQQM LSFLAMAVQS PGFLSQLTMQ QNPNNRQRAE ISKKRRFPAL 300 EHGGLKGVDA PTGQIVRYQP PPPPPPPPPP PPVDESAKTL LMPVPSPDEL TNSESMRIDF 360 DHLLPYADDM STGSNSSLPV EEDGFDMDFF SSYLENLLSD QRPVDDKQVD AHNMRTTNSD 420 IDFDFLMDGS LNLEPKR

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MMWKHESCCS MVDDIKGQRI KSPALRLLFH FHLGLGLGLG LGFMGGVRMV NDKGELLAMA  60
PPFLSKCYDI VDDSATDGTV SWGKNGDSFV IWDSHTFSRE LLPKYFKHSN LSSFVRQLNT  120
YMAGEDVGTE TVAKEVRVKE WGAAGRPERQ GFHKADHDRL EFANKSFIKD QKHLLKMIIR  180
RKPGHDHPQL QQSEAKGANV NACVEVGKFG LAEEVERLKR DKDLLRQELI KLRQHQQTTE  240
NQVHDLRQSL HGMEQNQQQM LSFLAMAVQS PGFLSQLTMQ QNPNNRQRAE ISKKRRFPAL  300
EHGGLKGVDA PTGQIVRYQP PPPPPPPPPP PPVDESAKTL LMPVPSPDEL TNSESMRIDF  360
DHLLPYADDM STGSNSSLPV EEDGFDMDFF SSYLENLLSD QRPVDDKQVD AHNMRTTNSD  420
IDFDFLMDGS LNLEPKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	3e-80	HSF family protein

Link Out ? help Back to Top
Ensembl	Dr18691.1