PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr17659.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

GeBP

Protein Properties

Length: 362aa MW: 39597.2 Da PI: 5.5741

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr17659.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	103.6	1.6e-32	96	195	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgke.psfskehdqkifelskkiWg 97 lfqrl+s+eDei++L+G+++f +++g+ +++ d+ fy+++k ++++++sk+qlveK+rrLKkK+++ v+++ sg+ f+++hd+ +fels++iW Dr17659.1 96 LFQRLFSDEDEIAILKGFLEFVTQRGTthASYQyDTGPFYDQIKAKLQLEFSKNQLVEKLRRLKKKYRTAVARIGSGRGgSPFKSPHDRAAFELSRQIWS 195 79**********************98866667***********************************777765156***************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MASAADDDLH RQRTGFESGA SDDTDSDDDS SFAPGGADAV EPPPNPNPSV AFTAADPQNG 60 DVDTSSPELK RRHISELGEI RSTSVAPAGP DDPRRLFQRL FSDEDEIAIL KGFLEFVTQR 120 GTTHASYQYD TGPFYDQIKA KLQLEFSKNQ LVEKLRRLKK KYRTAVARIG SGRGGSPFKS 180 PHDRAAFELS RQIWSPTFKR PRDQRAEAEN SNGDPNTPNP NPVDPIDSAA GFEAPDQSAL 240 QSRKRQRERS GPVEVAVEGL ATPAMSNNQM IEETMRSCLS PLLKELLNTA ILGPRISGGS 300 GSLAAWLNPL PFSLVSGGGA AGMDEKLRKQ QIMELEVLAK RMELVKEQIE LKLVELKSNK 360 RG

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MASAADDDLH RQRTGFESGA SDDTDSDDDS SFAPGGADAV EPPPNPNPSV AFTAADPQNG  60
DVDTSSPELK RRHISELGEI RSTSVAPAGP DDPRRLFQRL FSDEDEIAIL KGFLEFVTQR  120
GTTHASYQYD TGPFYDQIKA KLQLEFSKNQ LVEKLRRLKK KYRTAVARIG SGRGGSPFKS  180
PHDRAAFELS RQIWSPTFKR PRDQRAEAEN SNGDPNTPNP NPVDPIDSAA GFEAPDQSAL  240
QSRKRQRERS GPVEVAVEGL ATPAMSNNQM IEETMRSCLS PLLKELLNTA ILGPRISGGS  300
GSLAAWLNPL PFSLVSGGGA AGMDEKLRKQ QIMELEVLAK RMELVKEQIE LKLVELKSNK  360
RG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	249	RKRQRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-59	GeBP family protein

Link Out ? help Back to Top
Ensembl	Dr17659.1