PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr17586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | FAR1 | ||||||||
Protein Properties | Length: 688aa MW: 77764.1 Da PI: 8.5707 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 56.8 | 7.2e-18 | 43 | 126 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ + ++g++ +++C k g++++e k r+r+++ t+C+a+++vk++ dg +++ +l+HnH+++ Dr17586.1 43 RFYKRYARRVGFGVSVRRSSFT-KEGQCLYLELMCCKGGRKRPEPKF-----RKRTTSTTNCQARIRVKLWGDGMLHLELANLDHNHPVS 126 5*****************9998.6677****************9998.....999999*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 688 aa Download sequence |
MDDGCSGDGL DEDLMDGEQG ANGGYDGVPE VGMVFQNHQE VTRFYKRYAR RVGFGVSVRR 60 SSFTKEGQCL YLELMCCKGG RKRPEPKFRK RTTSTTNCQA RIRVKLWGDG MLHLELANLD 120 HNHPVSPSMA RFLNCYKQLS GNGKKRGNGD GSENAMVQVX EPSQMPFDRH SWVPVYLKDT 180 FWAGMSITQR SDTLTTFFDG YVDTKMAIKQ FVGKYEMALQ SKYEKEAQAD FETFHKRRPA 240 VSKFYMEEQL SKVYTLNMFK KFQDEIEAIM YCHASLLNVD ASVSTFDVKE CIFLEDGKKT 300 MNKNHTVLYN SVEKDVTCIC GSFQFRGILC RHALSVFKSQ QVHEIPSQYI LDRWKKDFKR 360 LHVAACSSDD VVANNRVDRY DYLSMRCLQL VEVGVISDKY QLALKLIKEV EKFLLSDKTY 420 EDTQPKIVSR VPKAQKVDRN KKSVSAEQNS NENVGPHGAL PLQVEYQIPP GMANGANEGY 480 MFQVVPTVPH LRPPEGVKPG AFPYGNHFGM PMNHQPYVAN QPAARPGLVY MFPGGVDPKA 540 FGNGPMMPWI YPPHMYQAAQ RPVAPTGSRT GLKAKRRRVH GSKLRQASEK PNEPSRTGQS 600 IEKPTEXSAT AQLAQCPTEP PVVEREAEKN EPLGDGHGIS GDSMVTIESF GYDDREIYTG 660 NLITAVDNVF SAYQKFNFLV KFFLLREM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 575 | 579 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 3e-49 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr17586.1 |