PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr17586.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family FAR1
Protein Properties Length: 688aa    MW: 77764.1 Da    PI: 8.5707
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr17586.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.87.2e-1843126190
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                +fY++YA++vGF v++++s+ + ++g++   +++C k g++++e k      r+r+++ t+C+a+++vk++ dg  +++  +l+HnH+++
  Dr17586.1  43 RFYKRYARRVGFGVSVRRSSFT-KEGQCLYLELMCCKGGRKRPEPKF-----RKRTTSTTNCQARIRVKLWGDGMLHLELANLDHNHPVS 126
                5*****************9998.6677****************9998.....999999*****************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 688 aa     Download sequence    
MDDGCSGDGL DEDLMDGEQG ANGGYDGVPE VGMVFQNHQE VTRFYKRYAR RVGFGVSVRR  60
SSFTKEGQCL YLELMCCKGG RKRPEPKFRK RTTSTTNCQA RIRVKLWGDG MLHLELANLD  120
HNHPVSPSMA RFLNCYKQLS GNGKKRGNGD GSENAMVQVX EPSQMPFDRH SWVPVYLKDT  180
FWAGMSITQR SDTLTTFFDG YVDTKMAIKQ FVGKYEMALQ SKYEKEAQAD FETFHKRRPA  240
VSKFYMEEQL SKVYTLNMFK KFQDEIEAIM YCHASLLNVD ASVSTFDVKE CIFLEDGKKT  300
MNKNHTVLYN SVEKDVTCIC GSFQFRGILC RHALSVFKSQ QVHEIPSQYI LDRWKKDFKR  360
LHVAACSSDD VVANNRVDRY DYLSMRCLQL VEVGVISDKY QLALKLIKEV EKFLLSDKTY  420
EDTQPKIVSR VPKAQKVDRN KKSVSAEQNS NENVGPHGAL PLQVEYQIPP GMANGANEGY  480
MFQVVPTVPH LRPPEGVKPG AFPYGNHFGM PMNHQPYVAN QPAARPGLVY MFPGGVDPKA  540
FGNGPMMPWI YPPHMYQAAQ RPVAPTGSRT GLKAKRRRVH GSKLRQASEK PNEPSRTGQS  600
IEKPTEXSAT AQLAQCPTEP PVVEREAEKN EPLGDGHGIS GDSMVTIESF GYDDREIYTG  660
NLITAVDNVF SAYQKFNFLV KFFLLREM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1575579KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.13e-49FAR1 family protein