PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16774.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HSF
Protein Properties Length: 272aa    MW: 32012.1 Da    PI: 7.4116
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16774.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.6e-36261172102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++++sw e++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+ll++i+
     Dr16774.1  26 FLTKTYQLVDDPSTNHIVSWGEDESTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKVVADR---------WEFANEFFRRGEKHLLTEIH 113
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
     Dr16774.1 114 RRRT 117
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MAFMVERGGD MVTSMDSSNK SVPAPFLTKT YQLVDDPSTN HIVSWGEDES TFVVWRPPEF  60
ARDLLPNYFK HNNFSSFVRQ LNTYGFRKVV ADRWEFANEF FRRGEKHLLT EIHRRRTPQI  120
SHQQQYYHHD TPQPPATFHC MEVTRSWMEP PQPISTRDAD VLSALSEDNQ RLRRSNSLLL  180
SELTHMKKLY NDIIYFIQNH VRPVPPPDHH HHHHHHHHQR PGKIIELGVD EKEKEKENTT  240
VKLFGVPLQS KKRLQCEIGQ VHQVSECESL EV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-81HSF family protein