PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16683.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GeBP
Protein Properties Length: 349aa    MW: 38590.4 Da    PI: 6.1881
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16683.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573108.16.3e-3484182297
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                lfqrl+s+eDei++L+G+ +f +++g+   +++ d+  fy+++k+++++++sk+qlveK+rrLKkK+++ v++++ g++ sf+++hd+++fe+s++iW 
  Dr16683.1  84 LFQRLFSDEDEITILKGFREFVSQRGTthASYQyDTGPFYDQIKEKLNLEFSKNQLVEKLRRLKKKYRTAVARIAAGRSSSFKSPHDREAFEISSQIWS 182
                79************************98866667****************************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MASADDLGHG AFFDSCADDD SDSDDESFGP PPPPPSLVAA PTNPNPDGDL PTLSSDHQQG  60
PLSDIDAFPS NALVASSFDD SRRLFQRLFS DEDEITILKG FREFVSQRGT THASYQYDTG  120
PFYDQIKEKL NLEFSKNQLV EKLRRLKKKY RTAVARIAAG RSSSFKSPHD REAFEISSQI  180
WSPTFKRPRD QRAEAETNKV RIIDSKTLKA NPIYATADVD HHREQKPIKS RGRPRDQSEP  240
VEVAVVEGLP TPSMGNYNHG MGETVRSCVT PLFKELLNCV ILGPSMAGGL IGGSPALSPC  300
TPTSSLGGMD EKWRKQQIME LEVYAKRMDL VKELIQMKLA ELKSKGGNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-60GeBP family protein