PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15787.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 1364aa MW: 150262 Da PI: 4.5969

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15787.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.3	3e-53	8	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lp GfrFhPtdeel+++yLk+k++g+ + evi+e+d++k+ePwdLp k +++++ ew+fFs+rd+ky++g+r+nrat++gyWkatgkd+++ s ++ Dr15787.1 8 LPLGFRFHPTDEELINHYLKRKINGRIRSDVEVIPEIDVCKCEPWDLPdKsLIRSDDPEWFFFSPRDRKYPNGHRSNRATEAGYWKATGKDRTIRS-RSL 106 699*********************988879***********96446677888**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLvf++grapkg++t+W+mheyr Dr15787.1 107 VVGMKKTLVFHRGRAPKGVRTNWIMHEYRT 136 **************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1364 aa Download sequence
MTVPLGSLPL GFRFHPTDEE LINHYLKRKI NGRIRSDVEV IPEIDVCKCE PWDLPDKSLI 60 RSDDPEWFFF SPRDRKYPNG HRSNRATEAG YWKATGKDRT IRSRSLVVGM KKTLVFHRGR 120 APKGVRTNWI MHEYRTTEPD FECGEQGGFV LCRLFRKPEE RSPSPNIDEM EINEVSPSPP 180 RSSPDEIPQE PDASVELASP VNQKLPVSIG QGVPQSLPDS TEKQSSGIER WLADKAEYPA 240 VYTVKPESDN FNSNVSRDSG FPQAEEETED HLLMHEIAQI CDAQYDQIYF DGFPNVSSPA 300 LPYTNYPFTD NPAIGSDMGL LZGVSDDPSI AAFLDAILSH QDEDSSGDFC LQSCIPEISV 360 EGQSFTGAPL GESPSVKDNG SISDADTEVG LAECGLPPGA SDWSFQPPLL IRDSLHVSSN 420 IQQEIAPVSL LSTESSAPEV SLVDSAADSA YDLLHSFADS TYQNNFNQEG HSEETXVXIR 480 RHQPQYRNSM TNMLANQGTA FRRIXLQLPF DEEQLSFGNE ESSDTKNDDE FSVATVASSN 540 NKDGQEVNQL DTGVNSYQKD DYVPEMGDCN SSNTEVSNCL LDDNNGNLEV NNVVRESKAE 600 DEDEVLHTAH PDKHNNLASY EINTITQKSI XVQLETLQDS GPTLRLRSKL TNYSNGSNRR 660 NTSMDSKINH NTPLTSITTN KKFTVKKLDQ NQKAKQNSNL SPSSSSSLLD LLRPSSASPE 720 PTKMNFLGAT FDASNRGHPS PSSSPISWSS FVLSPNAPPF KLDRPKTQPP PPPPAPSPSS 780 FSSVAGCRTS IQSSSSNQPC YESAVDDGXD LERAEGLSGV VAASSLFGKS SNYDXFSFQN 840 EGTYGGLAAY EDXSXVWLGK HVNPFSERAP SELGCSGWPY NGRQPAYEEN VAPQYDNFGS 900 SCLLTNASSS EIPYTYFPES ISVGIPVWSS NSKSLDNEFV VQHDSCLVTP IGFYSSTTNS 960 TQTLNTQLSP RTNSPADKST STYESSWFHH EDMDTASKNL PAKARDPSMR ITIESKEGYW 1020 NRGRVNSHAD KXKXSYSLKN GSPSAGELGT GNLXDPFRIN ELSPSKSSNS ESNPCTSNIF 1080 MQVPSETVDQ DNLAEDSPCW KGVAAPKHTP PSMKSISFPN VVMESKSCCN LDQVQTHLPF 1140 ACSCPATLDE DGRRVYDANG QDSSFLREPI AIGLPKAQEK FVLMNRRSDD AENQNRTRIP 1200 NSESFKEQIR ETSKACERDS QFKDDGQLCL EAGVLAINRA PIEDETIKLX GCVNTAVQDH 1260 LSDPHFYAKE TFMNLPGEVK PLGSCSVSEK CSQAGGVQLV IKAMHNLSQV LLSTNFPGGN 1320 DLRENDFEVL QGLINNLEAF SRNKGKVNNL KFANYFRCNR VALT

Sequence ? help Back to Top

Protein Sequence Length: 1364 aa Download sequence

MTVPLGSLPL GFRFHPTDEE LINHYLKRKI NGRIRSDVEV IPEIDVCKCE PWDLPDKSLI  60
RSDDPEWFFF SPRDRKYPNG HRSNRATEAG YWKATGKDRT IRSRSLVVGM KKTLVFHRGR  120
APKGVRTNWI MHEYRTTEPD FECGEQGGFV LCRLFRKPEE RSPSPNIDEM EINEVSPSPP  180
RSSPDEIPQE PDASVELASP VNQKLPVSIG QGVPQSLPDS TEKQSSGIER WLADKAEYPA  240
VYTVKPESDN FNSNVSRDSG FPQAEEETED HLLMHEIAQI CDAQYDQIYF DGFPNVSSPA  300
LPYTNYPFTD NPAIGSDMGL LZGVSDDPSI AAFLDAILSH QDEDSSGDFC LQSCIPEISV  360
EGQSFTGAPL GESPSVKDNG SISDADTEVG LAECGLPPGA SDWSFQPPLL IRDSLHVSSN  420
IQQEIAPVSL LSTESSAPEV SLVDSAADSA YDLLHSFADS TYQNNFNQEG HSEETXVXIR  480
RHQPQYRNSM TNMLANQGTA FRRIXLQLPF DEEQLSFGNE ESSDTKNDDE FSVATVASSN  540
NKDGQEVNQL DTGVNSYQKD DYVPEMGDCN SSNTEVSNCL LDDNNGNLEV NNVVRESKAE  600
DEDEVLHTAH PDKHNNLASY EINTITQKSI XVQLETLQDS GPTLRLRSKL TNYSNGSNRR  660
NTSMDSKINH NTPLTSITTN KKFTVKKLDQ NQKAKQNSNL SPSSSSSLLD LLRPSSASPE  720
PTKMNFLGAT FDASNRGHPS PSSSPISWSS FVLSPNAPPF KLDRPKTQPP PPPPAPSPSS  780
FSSVAGCRTS IQSSSSNQPC YESAVDDGXD LERAEGLSGV VAASSLFGKS SNYDXFSFQN  840
EGTYGGLAAY EDXSXVWLGK HVNPFSERAP SELGCSGWPY NGRQPAYEEN VAPQYDNFGS  900
SCLLTNASSS EIPYTYFPES ISVGIPVWSS NSKSLDNEFV VQHDSCLVTP IGFYSSTTNS  960
TQTLNTQLSP RTNSPADKST STYESSWFHH EDMDTASKNL PAKARDPSMR ITIESKEGYW  1020
NRGRVNSHAD KXKXSYSLKN GSPSAGELGT GNLXDPFRIN ELSPSKSSNS ESNPCTSNIF  1080
MQVPSETVDQ DNLAEDSPCW KGVAAPKHTP PSMKSISFPN VVMESKSCCN LDQVQTHLPF  1140
ACSCPATLDE DGRRVYDANG QDSSFLREPI AIGLPKAQEK FVLMNRRSDD AENQNRTRIP  1200
NSESFKEQIR ETSKACERDS QFKDDGQLCL EAGVLAINRA PIEDETIKLX GCVNTAVQDH  1260
LSDPHFYAKE TFMNLPGEVK PLGSCSVSEK CSQAGGVQLV IKAMHNLSQV LLSTNFPGGN  1320
DLRENDFEVL QGLINNLEAF SRNKGKVNNL KFANYFRCNR VALT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	8e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr15787.1