PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15775.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 400aa MW: 44245.9 Da PI: 9.2067

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15775.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	266	303	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + Dr15775.1 266 FEHflHPYPTDIDKQMLAKHTGLSRNQVSNWFINARVR 303 665559******************************88 PP
2	BELL	93.5	2e-30	162	230	3	71
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 +e q kka+L+s+l+eV+ rY +y++qlq+vi +Fe vagl +a+pY+ +Al+++S++F+cL + i+++ Dr15775.1 162 KEQQWKKARLVSMLDEVCSRYTHYYQQLQAVIQAFESVAGLSTAAPYALMALQTMSKQFKCLTNLISDH 230 5899************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MTNLMLCITS HRTVAERSSD SPILTNPLLL PIPSSSFSAS SLNPNSNLNS GCLGGSAFPI 60 PSSSSSSPNP NLNLNSGRLG GSASRAFSLL FSSAALFEHA PSRPFTGYAA VLSGSRYLEP 120 ALQVLEVACG VGRVRAFFYG DHFGMEDTCR AGRVVNESVL GKEQQWKKAR LVSMLDEVCS 180 RYTHYYQQLQ AVIQAFESVA GLSTAAPYAL MALQTMSKQF KCLTNLISDH XHLTARNPET 240 YRQPPIWRPQ RGLPERAVAV LRKWLFEHFL HPYPTDIDKQ MLAKHTGLSR NQVSNWFINA 300 RVRLWKPMVE EVQSLELSQS XQFPAGDRKI EELGKGLSAA GRGNGGVPLT LALHQSNEVC 360 IYKPLHRNAV RSFGFDYDDI TRNTGKFNGN ICTDSFCRYL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MTNLMLCITS HRTVAERSSD SPILTNPLLL PIPSSSFSAS SLNPNSNLNS GCLGGSAFPI  60
PSSSSSSPNP NLNLNSGRLG GSASRAFSLL FSSAALFEHA PSRPFTGYAA VLSGSRYLEP  120
ALQVLEVACG VGRVRAFFYG DHFGMEDTCR AGRVVNESVL GKEQQWKKAR LVSMLDEVCS  180
RYTHYYQQLQ AVIQAFESVA GLSTAAPYAL MALQTMSKQF KCLTNLISDH XHLTARNPET  240
YRQPPIWRPQ RGLPERAVAV LRKWLFEHFL HPYPTDIDKQ MLAKHTGLSR NQVSNWFINA  300
RVRLWKPMVE EVQSLELSQS XQFPAGDRKI EELGKGLSAA GRGNGGVPLT LALHQSNEVC  360
IYKPLHRNAV RSFGFDYDDI TRNTGKFNGN ICTDSFCRYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	7e-68	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr15775.1