PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15625.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 515aa MW: 55597.4 Da PI: 7.2969

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15625.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.6e-30	271	329	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gC+v+k+v+r+aed++++++tYeg+Hnh+ Dr15625.1 271 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCSVRKQVQRCAEDKTILITTYEGNHNHP 329 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MERHREMELL HSGEYSGSDP GGSSRRDIIE EVDFFSKSRL RDEAAGLQPE IPNSSPPPPP 60 PPGEPSINTG LNLLTMNSGG SQQHEVEEKM KNSSSSSSNI NNNKLLALQA ELDRLGDENR 120 KLRSMLDHLM KNYNDLQNQL LLAMQQQARK AAEDGQKENK NDVQSPAPIT ARQFMDPGPA 180 CMQDTEDPSK SGEGEEEQSP LRNHPHEHGI VSLAKRRLPM DSIPSEQTSP SWGTSKSPKQ 240 VPERTTDQSS ELACRKARVS VRARSDAPMI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAA 300 GCSVRKQVQR CAEDKTILIT TYEGNHNHPL PPAAMAMANT TTAAATMLLS GSTSSKDSLT 360 NPTNGFYQPM PYASTMATLS ASAPFPTITL DLTQPPGPLQ IHRQQTPATP FPLTLPMYMP 420 QKVPGLVVPP GLQFGQQQPS SVMDTVTAAI ASDPNFTSAL AAAIKSIIST PRSPNAATTA 480 TNGPSTPPAA AAALHAFPGS PQFPQSCTTF STNTN

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MERHREMELL HSGEYSGSDP GGSSRRDIIE EVDFFSKSRL RDEAAGLQPE IPNSSPPPPP  60
PPGEPSINTG LNLLTMNSGG SQQHEVEEKM KNSSSSSSNI NNNKLLALQA ELDRLGDENR  120
KLRSMLDHLM KNYNDLQNQL LLAMQQQARK AAEDGQKENK NDVQSPAPIT ARQFMDPGPA  180
CMQDTEDPSK SGEGEEEQSP LRNHPHEHGI VSLAKRRLPM DSIPSEQTSP SWGTSKSPKQ  240
VPERTTDQSS ELACRKARVS VRARSDAPMI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAA  300
GCSVRKQVQR CAEDKTILIT TYEGNHNHPL PPAAMAMANT TTAAATMLLS GSTSSKDSLT  360
NPTNGFYQPM PYASTMATLS ASAPFPTITL DLTQPPGPLQ IHRQQTPATP FPLTLPMYMP  420
QKVPGLVVPP GLQFGQQQPS SVMDTVTAAI ASDPNFTSAL AAAIKSIIST PRSPNAATTA  480
TNGPSTPPAA AAALHAFPGS PQFPQSCTTF STNTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-66	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr15625.1