PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15614.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 317aa    MW: 34680.2 Da    PI: 7.9411
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15614.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.8e-161457144
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +g W++eEde+l++ ++++G g+W+++++  g+ R++k+c++rw
        Dr15614.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRW 57
                     678***************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWSQI  60
AAQLPGRTDN EIKNLWNSCI KKKLRQRGID PNTHKPLTET NEPGEDIKAA PPNSSDNKSS  120
SKQLQLLVST EPAPPPPPFM HLEDGYHQAE CSTSNKNSIT TTKELFQLVT CHESSSNSMS  180
YVHLPQLTAS NPLLWFSQNP ELNCSNSTAI PSASTSSMML PVPTSSMGLI TPQCIPSYWE  240
AGQPSSNSSG STINSAANGI ELQRGAASFF DNAIFQCGMD ESCPSPVTPA SIFICKVLEQ  300
RSILCYAAGD SYSLAIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.33e-60MYB family protein