PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr15338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 151aa MW: 17123.3 Da PI: 8.8259 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 27 | 76 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f +aeeAa a+++a+ +++g Dr15338.1 27 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFESAEEAAMAYDQAAFSMRG 76 9*******.**********44465..*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MASSSSSSFE TLSSYTEPSE KKKNMTYRGV RRRPWGKFAA EIRDSTRNGV RVWLGTFESA 60 EEAAMAYDQA AFSMRGPRAM LNFPVEKVVE SLKSLGCGEE EDDYGNCSPA MALKRKHSMR 120 RRRRRSERLV LEDLGSQYLE ELLSASLMDS C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 125 | RRRRRR |
2 | 120 | 128 | RRRRRRSER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-41 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr15338.1 |