PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15057.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 341aa MW: 38644.2 Da PI: 7.4839

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15057.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	173	226	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Dr15057.1 173 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 226 9****************************************************7 PP
2	Myb_DNA-binding	48.8	1.7e-15	174	225	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Dr15057.1 174 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 225 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MELFPAQPDL SLQISPPNNK QTSNWVRRED ENMELGFWNK ALDSNXNSIN LSSDTTFNLT 60 LSNPTPSSTT ITTLNHSHQP SSFIHQDLSL MRPIRGIPLY HHSSTSSFPY LHHHHHHHHH 120 HHQQQQQQQQ QQQQQQHNYS CDSSSITTGS TLYAATRARF VSRFPAKRSM RAPRMRWTTT 180 LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DRPPASSGQS 240 DGFENGSSGE VSDDNLFDIQ NQGRSNGLST ENFGSSLWSN SSSRGNWLHE NQIGSNRGND 300 QSFEKEMQSK SYEMMSELNT SCVSDTSPKK LSLEFTLGTP H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	9e-58	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr15057.1