PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15042.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ARR-B

Protein Properties

Length: 572aa MW: 64349.1 Da PI: 6.1819

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15042.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.9	4.5e-28	336	390	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ Dr15042.1 336 KMKVDWTPELHKQFVQAVEQL-GIDQAIPSKILELMKVDGLTRHNVASHLQKYRMH 390 5689***************.******************************96 PP
2	Myb_DNA-binding	44.1	4.7e-14	339	388	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m g+t+ ++ s++qky+ Dr15042.1 339 VDWTPELHKQFVQAVEQLGIDqaIPSKILELMKvDGLTRHNVASHLQKYR 388 57***********************************************7 PP
3	Response_reg	21.7	1e-08	20	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+ d++ +e + le +y +v + + +al+ + k + +++ ++ + + + +++ ++ + +lp ivv+ + +++ +++ +Ga Dr15042.1 20 VLLLDEDAPSAEQTKLKLEAMDY-VVSLFFNENDALDAIsrKVESFHVAIVEVTSENNN-DSIFRFLEM-ARDLPTIVVSNVQCLSTMMKCIALGAA 113 7899999999999999*****.***********555555***9888843.233333333.3489******************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl+Kp + +++++ Dr15042.1 114 EFLEKPLSDDKIRN 127 *******99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MVCLADDFVV WKDFPKGLRV LLLDEDAPSA EQTKLKLEAM DYVVSLFFNE NDALDAISRK 60 VESFHVAIVE VTSENNNDSI FRFLEMARDL PTIVVSNVQC LSTMMKCIAL GAAEFLEKPL 120 SDDKIRNLWQ HVVHKLTFPE QAFNGXGGVL SKSLKPIKET VVSMLHLESE TTDVKNEIPS 180 EVDNSEKEQQ LSBHDDMEAS DKFPAPSTPQ LEQGARLTDD GDFQDKPNCL SEKHSKDDMN 240 NLLGKSTCSE SKSVDIASNN INGAVSXKEA SVSAAEDEVN SPPDSKSDVS SALIKEDSLP 300 SQXAEKANSS GEDSKKRKSF DYNNPNSHSN KSNKKKMKVD WTPELHKQFV QAVEQLGIDQ 360 AIPSKILELM KVDGLTRHNV ASHLQKYRMH KRHILPKDDD RRWQHHADXM RRGNVPRSLV 420 PIPPYRYNYG YPTGQAYPAW GHPGYHPSGV QMWNHAAIQP WPRPPESWTW KHYSGIHADA 480 WGCPVVPPYG QYSLPSQYTP LNKSLDLTWD QNKELRAFAG FNLAEEVIDR AVKEAMNKPW 540 LPLPLGLKAP CTESVLAELH RQGILSIPPL RR

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MVCLADDFVV WKDFPKGLRV LLLDEDAPSA EQTKLKLEAM DYVVSLFFNE NDALDAISRK  60
VESFHVAIVE VTSENNNDSI FRFLEMARDL PTIVVSNVQC LSTMMKCIAL GAAEFLEKPL  120
SDDKIRNLWQ HVVHKLTFPE QAFNGXGGVL SKSLKPIKET VVSMLHLESE TTDVKNEIPS  180
EVDNSEKEQQ LSBHDDMEAS DKFPAPSTPQ LEQGARLTDD GDFQDKPNCL SEKHSKDDMN  240
NLLGKSTCSE SKSVDIASNN INGAVSXKEA SVSAAEDEVN SPPDSKSDVS SALIKEDSLP  300
SQXAEKANSS GEDSKKRKSF DYNNPNSHSN KSNKKKMKVD WTPELHKQFV QAVEQLGIDQ  360
AIPSKILELM KVDGLTRHNV ASHLQKYRMH KRHILPKDDD RRWQHHADXM RRGNVPRSLV  420
PIPPYRYNYG YPTGQAYPAW GHPGYHPSGV QMWNHAAIQP WPRPPESWTW KHYSGIHADA  480
WGCPVVPPYG QYSLPSQYTP LNKSLDLTWD QNKELRAFAG FNLAEEVIDR AVKEAMNKPW  540
LPLPLGLKAP CTESVLAELH RQGILSIPPL RR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	315	338	KKRKSFDYNNPNSHSNKSNKKKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-121	ARR-B family protein

Link Out ? help Back to Top
Ensembl	Dr15042.1