PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14705.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HD-ZIP
Protein Properties Length: 722aa    MW: 79910.9 Da    PI: 5.2802
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14705.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.25.8e-1882136256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                +k +++t+ q++e+e+lF+++++p+ ++r+eL++ lgL+  qVk+WFqN+R++ k
  Dr14705.1  82 KKFHRHTQRQIHEMEALFRECPHPDDKQRKELSRALGLELLQVKFWFQNKRTQIK 136
                566789*********************************************9877 PP
2START152.14.6e-482554751206
                HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
      START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                ela + ++e++ +a+++ep+W++      + +n+ ++ q+f ++ +      ++ea r ++vv+m +++  e l+d + +W   ++    + +tl+v s 
  Dr14705.1 255 ELAVASMDEVIGMAQLGEPLWMSRIdwplDTLNEGIYNQSFLKGLGmkltgLKTEATRQTVVVPMKAVNIIEMLMDAN-RWMAFFPsivsRGATLDVYSR 353
                578899***********************************99888********************************.99999999999********** PP

                T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHH CS
      START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwl 180
                g      galq+m+a +q+ +plvp R+ +fvRy++q+ +++w++vdvS+d  + +p s       ++pSg+li++ s+  skvtwveh+++++  + ++
  Dr14705.1 354 GaadnfnGALQVMSAMFQMATPLVPsREGLFVRYCKQHAEKTWAVVDVSLDGLRTNP-SLTWR---RRPSGCLIQEISESFSKVTWVEHMEVDDTDVAEI 449
                *********************************************************.44444...6********************************* PP

                HHHHHHHHHHHHHHHHHHHTXXXXXX CS
      START 181 lrslvksglaegaktwvatlqrqcek 206
                +++lv+sgla+ga++w  +l+rqc +
  Dr14705.1 450 YKPLVNSGLAFGAQRWALALKRQCHR 475
                ***********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
MVAPEEHVGE EARGENEMLQ NGDHGQNVSD VSQGSHQEME DTDILDTDEN ELQKLLEDEL  60
EEDSEFGSST GEQNPRRVAR RKKFHRHTQR QIHEMEALFR ECPHPDDKQR KELSRALGLE  120
LLQVKFWFQN KRTQIKAQNE RQENSHLREE SVRLSSESTM MREALRQGLC INCGGCLAMG  180
EWASEGNDLR AENAKLKGEI ERISAIVAKY VGKQPMNSHQ HSPPVIPCLG TGLGVYNVGL  240
ELVEGIGIEK QVIIELAVAS MDEVIGMAQL GEPLWMSRID WPLDTLNEGI YNQSFLKGLG  300
MKLTGLKTEA TRQTVVVPMK AVNIIEMLMD ANRWMAFFPS IVSRGATLDV YSRGAADNFN  360
GALQVMSAMF QMATPLVPSR EGLFVRYCKQ HAEKTWAVVD VSLDGLRTNP SLTWRRRPSG  420
CLIQEISESF SKVTWVEHME VDDTDVAEIY KPLVNSGLAF GAQRWALALK RQCHRITSVN  480
NDAPVNQIGV LTSVVMRKNL MKLSERMVRI FANGVSSATS DQWSLVAGTG ANNGVRATTQ  540
KRQNQRGSPP GIIVNATTSV WLQVPTRRLF EFLHSETSRC QWDILTKNGV IEEVSQVADG  600
GSHENCISLL HVKSSVMVLQ ESSMDASGAY VIYAPLDDAA MGMVLDNGDP DLVELLPSGF  660
AILPDGLVGV LNEWNTAASL LTVSFQILLH AAPSERIPVS SISAINNLIA GIVDRIKSAV  720
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein