PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14675.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 604aa MW: 66419.8 Da PI: 7.4473

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14675.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	409	446	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Dr14675.1 409 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 446 564459******************************88 PP
2	BELL	126.5	9.5e-41	269	339	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q+kkakLls+l+eVd+rY++y++q+q+v++sF+av+g+gsa+pYt+lA+ka+SrhFrcLkda++ q+ Dr14675.1 269 RFEHQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGYGSATPYTALAQKAMSRHFRCLKDAVSAQL 339 779*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MSQSYQHGIL SNFSDEYARR DKLRVQQGFN HIPNLLVPVL QAGQDQDQQI QNIYESPPPP 60 SGAGNMLSEM FNYSSSAASD VLLASQVPVS FRQRPTGNNI GSFSGVGVGG GGGGENWYGI 120 MNSGSGLNSI DEQPTQHVFF MKGSPPSAHD HLHNHESSTF PMVSFGEASY SSGGVVEGQG 180 LSLSLAGDNH RGPIGLMNVL RGSKFVRPTK ELLEEFCSVG RGKLKSSGRN RVGHGSISNP 240 NPNPNPNSSA CSSSSSKDVV VPPLSPADRF EHQRKKAKLL SMLDEVDRRY NHYCDQMQMV 300 VNSFDAVMGY GSATPYTALA QKAMSRHFRC LKDAVSAQLK QICEFLGDKS AGGGGSGITK 360 GETPRLKLLD QNLRRQRAFH HLGMMEQEAW RPQRGLPERS VNVLRAWLFE HFLHPYPSDA 420 DKHLLARQTG LSRNQVSNWF INARVRLWKP MVEEMYQHEA KDHEECDDKE RSIEERQQRA 480 QSPTQHHHQQ QHNTEKPETN ALESDISSHS QGPTSISFHQ HHHHGHHGHH HRSSSDDAIL 540 ATSELDVHGV PGDDMFRLAA VYGGVANALV AGDVSLTLGL RHAGNGSSAK PENNRPFALR 600 DCGG

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MSQSYQHGIL SNFSDEYARR DKLRVQQGFN HIPNLLVPVL QAGQDQDQQI QNIYESPPPP  60
SGAGNMLSEM FNYSSSAASD VLLASQVPVS FRQRPTGNNI GSFSGVGVGG GGGGENWYGI  120
MNSGSGLNSI DEQPTQHVFF MKGSPPSAHD HLHNHESSTF PMVSFGEASY SSGGVVEGQG  180
LSLSLAGDNH RGPIGLMNVL RGSKFVRPTK ELLEEFCSVG RGKLKSSGRN RVGHGSISNP  240
NPNPNPNSSA CSSSSSKDVV VPPLSPADRF EHQRKKAKLL SMLDEVDRRY NHYCDQMQMV  300
VNSFDAVMGY GSATPYTALA QKAMSRHFRC LKDAVSAQLK QICEFLGDKS AGGGGSGITK  360
GETPRLKLLD QNLRRQRAFH HLGMMEQEAW RPQRGLPERS VNVLRAWLFE HFLHPYPSDA  420
DKHLLARQTG LSRNQVSNWF INARVRLWKP MVEEMYQHEA KDHEECDDKE RSIEERQQRA  480
QSPTQHHHQQ QHNTEKPETN ALESDISSHS QGPTSISFHQ HHHHGHHGHH HRSSSDDAIL  540
ATSELDVHGV PGDDMFRLAA VYGGVANALV AGDVSLTLGL RHAGNGSSAK PENNRPFALR  600
DCGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-123	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr14675.1