PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr14599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | YABBY | ||||||||
Protein Properties | Length: 183aa MW: 20138.9 Da PI: 9.0087 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 150.2 | 1.9e-46 | 2 | 151 | 2 | 162 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 ++++s+e++Cyv+C++Cnt+lav vP + l+ +vtv+CGhC +l ++ + + l+++s s +++++ ++ + + +++s++ ++++ Dr14599.1 2 ELVNSTEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNHLSFLSPRSLLHSLSSSSS--SSDHPHIT---------FQGTCSDCRKSSNQLPQSSS 90 67899************************************99888777777777777775..33334433.........22233333333444444444 PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s+++d ++p +p v++PPek+ r Psaynrf+keeiqrika+ P+i hreafs+aaknWa Dr14599.1 91 STSTDPSTPSAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAEKPNIPHREAFSMAAKNWAK 151 6677888999999***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MELVNSTEHL CYVRCTYCNT VLAVGVPCKR LMDTVTVKCG HCNHLSFLSP RSLLHSLSSS 60 SSSSDHPHIT FQGTCSDCRK SSNQLPQSSS STSTDPSTPS APFVVKPPEK KHRLPSAYNR 120 FMKEEIQRIK AEKPNIPHRE AFSMAAKNWA KCDPRASTAA SSSVKERPES ANGFIIESLN 180 ALK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-44 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr14599.1 |