PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14593.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 275aa MW: 29890.4 Da PI: 7.3926

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14593.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.6e-17	104	148	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE+++++++ k++G+g+W++Iar++ ++Rt+ q+ s+ qky Dr14593.1 104 AWSEEEHKQFLCGLKKFGKGDWRSIARHFVLTRTPTQVASHAQKY 148 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MDVDGGGESG GTEWDWGGNK AFENALAQHF LDSSGEPEME RIAAAMPGKS VEDLAEHYRL 60 LEXDVNLIES GQVGLMEYVN EGSPEQGGGK KSGGQAQERR KGVAWSEEEH KQFLCGLKKF 120 GKGDWRSIAR HFVLTRTPTQ VASHAQKYFN RLKASNKDRR RSSIHDITIV DSADASDPQR 180 TNSSPRVGAM LPPVITAPTV GPILPHGMPG IQTPQMPVLP SGVSPYGVAP HANFPVGRIP 240 NMLYGPYPMQ APVTGAPMKF LPKSDQMLHH PSSNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-54	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr14593.1