PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14226.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family E2F/DP
Protein Properties Length: 450aa    MW: 50270.1 Da    PI: 4.937
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14226.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP78.94.5e-25136201171
    E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                r++ sL+ lt+kf++ll+++++ +++ln++a++L   +v  k+RRiYDi+NVLe+++liek  kn+i+wkg
  Dr14226.1 136 RYDCSLGFLTKKFVNLLKQAPDHTIDLNTAAETL---EV--KKRRIYDITNVLEGIGLIEKAIKNRIHWKG 201
                5788******************************...99..9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MSGERDAGNQ GSKLQIVKPM SRRAPLRSIF GNLDDYHRFS DADDRRVDMA EEAIVIKTPL  60
KRKLELEDDK VARSSELTPS SGCVAVSSPL LTPVSSKGDR IYGRAKVAKY NNSEPQTPMS  120
DVGSPRNIHS TPVGCRYDCS LGFLTKKFVN LLKQAPDHTI DLNTAAETLE VKKRRIYDIT  180
NVLEGIGLIE KAIKNRIHWK GLDELSTGNG DDNVSVMQGE VENLSIQEHD LDDRISEMQE  240
KVKGLSQDEN NQRWLFVTEE DIKRIPCFQN ETLIAIKAPH GATMEVPDPD EQTGDHHERR  300
YRIVLRSNMG PIDVYLVSQF EEMHPPTSNL VSVERSAVST VTENITGNAI EQQNAHDTQQ  360
AFSNTTTSED FIGGIRRILP SEIHHDTDYW LLSEADVSMT DMWRTPSDAS WNWMDGLNLD  420
ALNEGHSMAS PQTPSSGVQV TPPSKTDSKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-119E2F/DP family protein