PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr14027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | CO-like | ||||||||
Protein Properties | Length: 239aa MW: 25985.1 Da PI: 6.6696 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19 | 2.9e-06 | 8 | 46 | 5 | 37 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ + +++ +C ++ lC +C ++ H+ H Dr14027.1 8 ACDYCXGQRAVVYCSPDSARLCLSCDVHVHSAnalasrH 46 6***************************99545555555 PP | |||||||
2 | CCT | 25.7 | 4.1e-10 | 205 | 238 | 1 | 34 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRp 34 R +a++RY++K+k+RkF K +Y +RK+ e+++ Dr14027.1 205 RTEAKMRYNQKKKSRKFGKNLKYGTRKVKSEKMK 238 899************************9999885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDAAAAAACD YCXGQRAVVY CSPDSARLCL SCDVHVHSAN ALASRHVRSL ICDRCLVQPA 60 ITWCMDEGAI LCHDCDCCAF SFACSSLLHR RQPVGCYSGC PSSSDLLSLW SSVLNFHCSS 120 DDVCGLYPFQ DASLDFAADN LVEGVLDNSD QGMMINGNGI QHVGSISISN HTGESSAVDY 180 QDCGVSPMLL NNESSTLDAN YPQARTEAKM RYNQKKKSRK FGKNLKYGTR KVKSEKMKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48250.1 | 5e-25 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr14027.1 |