PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13973.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GeBP
Protein Properties Length: 281aa    MW: 33326.9 Da    PI: 9.1393
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13973.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57337.37.6e-1257155297
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkks...isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                +f r+ws + e+ lL     +k k+      + ++ +d + +++kk+   +s k++k+q++ K+r++++K+ kk       + ps + + + + +els+k
  Dr13973.1  57 KFARIWSVQEELDLLNVCERYKRKKAPefklHGKHSLDSLLDYMKKKsphLSDKYEKQQIFHKLRNMRRKYLKKILG----EGPSRNDPFELELYELSRK 152
                799******************99987645445566899999999986444899******************998876....999**************** PP

     DUF573  95 iWg 97 
                iW 
  Dr13973.1 153 IWY 155
                **5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MAEEITRDTE PPHSQLTSDK GKKKMALKQE AIVERGMEEE QIEQVNMTQS SDSKRSKFAR  60
IWSVQEELDL LNVCERYKRK KAPEFKLHGK HSLDSLLDYM KKKSPHLSDK YEKQQIFHKL  120
RNMRRKYLKK ILGEGPSRND PFELELYELS RKIWYKEKEN EKENKKENEK EKENDNENEK  180
RFPCLTRAVE QCSSGFPYVF QGSKMVDMID PLKAEKLEKE WAKFQNYALS HWTLLMRKTL  240
DLLIETXKKS DYLLPMHVVH TVVHSVDSSQ YPIAQVQSPQ P