PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13365.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 232aa    MW: 26595 Da    PI: 9.4997
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13365.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.93.1e-3057754128
        NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                +ekewyfFs+rd+ky++g+r+nra+  gyWkatg dk++ s   + vg+kk Lvfy+g+apkg kt+W+mheyrl
  Dr13365.1   5 GEKEWYFFSPRDRKYPNGSRPNRAAGLGYWKATGADKPIGS--PKPVGIKKALVFYTGKAPKGDKTNWIMHEYRL 77 
                689************************************99..789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAMYGEKEWY FFSPRDRKYP NGSRPNRAAG LGYWKATGAD KPIGSPKPVG IKKALVFYTG  60
KAPKGDKTNW IMHEYRLANV DRTPRRKNSL RLDDWVLCRI YNKRGGGAGE KQAGPKQGRE  120
EVEQKPVIGP NTIGPHVRRP NPNPMSELMC LDPSESLPRL HPDSSCSEHV ISSNEFTCDR  180
EVQSQPRWRE DWEKALEXPL NYMDATLNGF PHLEPVFKDP LQDIFMHLQK PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.14e-88NAC family protein