PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13148.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 73aa    MW: 8559.56 Da    PI: 9.507
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13148.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-07951344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT    + + +a +++  +   +W ++ar +g  +t +++k ++
        Dr13148.1  9 SWTVKQNKMFEEALARYDEDtpdRWQKVARAVG--KTVEEVKKHY 51
                     7******************9************8..9********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    
MASRNANTSW TVKQNKMFEE ALARYDEDTP DRWQKVARAV GKTVEEVKKH YDILVSDVNS  60
IDNGRVPYPN YRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.13e-32MYB_related family protein