PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr12911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | SBP | ||||||||
Protein Properties | Length: 206aa MW: 22588.6 Da PI: 9.8098 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 73.7 | 3.1e-23 | 148 | 197 | 1 | 50 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 +Cqv++C+adls ak+yhrrhkvCe hsk++++lv++++qrfCqqCsr+ Dr12911.1 148 MCQVDDCKADLSGAKDYHRRHKVCEPHSKTSKALVAKQMQRFCQQCSRYS 197 6***********************************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MEREVGAQVA PPMFIHQPLA GRFHEPPVPK KRDLPWQNPS YLHNQLPPSA LNPNSNWNPR 60 MWDWDSVSFS AKPSETLSLG TANPPAKVAP EPEKKKKGDD GSKGVNEVGE NLTLKLGGGS 120 YAVEAAPVVR PSKRVRSGSP GSGGNYPMCQ VDDCKADLSG AKDYHRRHKV CEPHSKTSKA 180 LVAKQMQRFC QQCSRYSSSL FASILL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20980.1 | 9e-49 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr12911.1 |