PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr12803.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family AP2
Protein Properties Length: 426aa    MW: 47078.2 Da    PI: 6.5163
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr12803.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-17133182155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Dr12803.1 133 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 182
                78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MVLDLNECSA SLETRVAAEG SGTSESSVLN GPGDEDSCSN PAPMALSFGI LRSAVEGEEE  60
GEGENGVPVE EAEHVTRMFF PPALVAGDSA TVKPPWTDPR FLPPSIGGMA PQQQRPPQVQ  120
VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF  180
RGVDADINFN LSDYDEDLKQ MGNLTKEEFV HSLRRQSTGF SRGSSKYRGV TLHKCGRWEA  240
RMGQLLGKKA YDKAALRCNG REAVTNFEPN TYEGELLPEV DAGDADLDLN LRLSQPSVHN  300
LEKDLNIMGL QLQGASFNDS DHRKARFADP SSHLSIQPNR LSLTNEESRI WSAPSGFLPM  360
YEERTREKRP LETTSPAATL NWWNWQMSRH SPAAAASSGF SNTSIPANHS SELPLASAAH  420
HYYFNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.24e-92AP2 family protein