PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr12626.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 163aa MW: 18426.2 Da PI: 5.2898 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 4 | 26 | 25 | 48 |
HHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 25 ktIartmgkgRtlkqcksrwqkyl 48 ++Ia +++ gRt++++k++w+++l Dr12626.1 4 SLIAGRLP-GRTANDIKNHWNTHL 26 58******.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 163 aa Download sequence |
MGXSLIAGRL PGRTANDIKN HWNTHLSKKI NSKDKSWNRK TIAKGITSIK XREKQGEFKI 60 IKPQPWTIPV NWSWLKDQPV HRGQLQDKSG INIADPLNNN VSREESATII PEKLDDVFLG 120 IDDMTVGEMG NNFEIGNIGG NGDEQFFEQE DAGWTDFLLD MDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G66370.1 | 1e-13 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr12626.1 |