PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11993.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 399aa MW: 44822.4 Da PI: 7.731

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11993.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF++av+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl Dr11993.1 42 KPRLKWTPELHERFIDAVNQLGGADKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	68.8	9.4e-22	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e+++dav+qlGg t+kt++r mg g+tl+++ks++qky+ Dr11993.1 44 RLKWTPELHERFIDAVNQLGGAdkaTPKTVMRLMGiPGLTLYHLKSHLQKYR 95 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MYHRQGNNIL STRPVFPPER HLFLQGANVQ GDSGLVLSTD AKPRLKWTPE LHERFIDAVN 60 QLGGADKATP KTVMRLMGIP GLTLYHLKSH LQKYRLSKNL QAQDNNGSTK NVISRMLPPD 120 RTPEVSGSTM NNVTNEFLIN CIFXNISTMQ IGEALQMQIE VQRRLHEQLE NSLYRRQVQR 180 HLQLRIEAQG KYLQSVLEKA QETLGKQNLG ATGLETTKLQ LSELATRVSN ECLGNSTHSL 240 PEYPNLHIIQ AETTQLAGCS TDSCLTSCNI NTKDQEIEKF SIGMRTKLRE GTISGTADDW 300 KPFCFVEDSD TQLLLAQTNK NSILSMNVNS ESKQRERDEK SCLEQPKCKR PVTSHEIEKQ 360 SNRFGAACLA TQLDLNAHNN DNNVAQSCKE FDLNGLGWG

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MYHRQGNNIL STRPVFPPER HLFLQGANVQ GDSGLVLSTD AKPRLKWTPE LHERFIDAVN  60
QLGGADKATP KTVMRLMGIP GLTLYHLKSH LQKYRLSKNL QAQDNNGSTK NVISRMLPPD  120
RTPEVSGSTM NNVTNEFLIN CIFXNISTMQ IGEALQMQIE VQRRLHEQLE NSLYRRQVQR  180
HLQLRIEAQG KYLQSVLEKA QETLGKQNLG ATGLETTKLQ LSELATRVSN ECLGNSTHSL  240
PEYPNLHIIQ AETTQLAGCS TDSCLTSCNI NTKDQEIEKF SIGMRTKLRE GTISGTADDW  300
KPFCFVEDSD TQLLLAQTNK NSILSMNVNS ESKQRERDEK SCLEQPKCKR PVTSHEIEKQ  360
SNRFGAACLA TQLDLNAHNN DNNVAQSCKE FDLNGLGWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-102	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr11993.1