PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11989.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 496aa MW: 53322.1 Da PI: 5.7614

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11989.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	4.9e-40	109	169	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk++ Dr11989.1 109 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHTA 169 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MTDPAIKLFG RTIPLQEGMD GDFPDKGSVL AAAEDFGEKD ADKELKFESK DPASNGPEEP 60 EQNGQHDPSD SCNGNGEDHE TSAQGDKVTE DAKNEQDQAG TETKVLKKPD KILPCPRCNS 120 MDTKFCYYNN YNVNQPRHFC KNCQRYWTAG GTMRNVPVGA GRRKNKHTAS HQHHLMMLSD 180 GMPTNRLDAS DLNHSRTLPS GPSTASIPIK VNATLLKFGP EAPLCESMAS VLNLGDQKKK 240 SELSSIACGE NVDEPSCASS MTVPNGVEKE HPEGATNLRN SSMPGYCTGV NPLHPLPSYP 300 GPPWVYPWSP GWNNVAAMAA GRSSNENGSE NGHPNPIPWN PPPMVVAPAF CAPAIPFPFI 360 PPSFWGCMPT WPYGAWNAPW AGSNGGLSPS SSTSNSGCSG NGGSPTLGKH SRDANSQCEE 420 KVEKSLWVPK TLRIDDPDEA AKSSIWATLG IKPDEGGIFK SFKSKSESKG QESDTAQVLH 480 ANPAALSRSQ TFQEST

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MTDPAIKLFG RTIPLQEGMD GDFPDKGSVL AAAEDFGEKD ADKELKFESK DPASNGPEEP  60
EQNGQHDPSD SCNGNGEDHE TSAQGDKVTE DAKNEQDQAG TETKVLKKPD KILPCPRCNS  120
MDTKFCYYNN YNVNQPRHFC KNCQRYWTAG GTMRNVPVGA GRRKNKHTAS HQHHLMMLSD  180
GMPTNRLDAS DLNHSRTLPS GPSTASIPIK VNATLLKFGP EAPLCESMAS VLNLGDQKKK  240
SELSSIACGE NVDEPSCASS MTVPNGVEKE HPEGATNLRN SSMPGYCTGV NPLHPLPSYP  300
GPPWVYPWSP GWNNVAAMAA GRSSNENGSE NGHPNPIPWN PPPMVVAPAF CAPAIPFPFI  360
PPSFWGCMPT WPYGAWNAPW AGSNGGLSPS SSTSNSGCSG NGGSPTLGKH SRDANSQCEE  420
KVEKSLWVPK TLRIDDPDEA AKSSIWATLG IKPDEGGIFK SFKSKSESKG QESDTAQVLH  480
ANPAALSRSQ TFQEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-53	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr11989.1