PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11875.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 301aa    MW: 32748.4 Da    PI: 9.2646
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11875.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding347e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+  l+ +v ++G g W++I +          R+  ++k++w+++
        Dr11875.1  5 KQKWTAEEESALKAGVIKYGAGKWRAILKDPEfsgtlCLRSNVDLKDKWRNL 56
                     79*****************************99999966***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGAPKQKWTA EEESALKAGV IKYGAGKWRA ILKDPEFSGT LCLRSNVDLK DKWRNLTVTA  60
SGWGSRERAR LALKKGKDVP KHDDNPLALE VVEDEFDDEI IDAKPLAISA ENLHINRPQK  120
ASLKLESLIF EAIMSLKEPS GSNKTDIAIY IEDRLVTPPE DLKKLLSAKL KALTASGKLI  180
KVKRKYRAAT GPSASEGRKS NGLLSEGRPR DTSKLEKDGP KMLLKSEIDA ELASMRNMTA  240
KEAAAAAARA VAEAEAAMAE AEEAMREAEE AEAEAEAAQA FAEAAMRTLN NRTAAKQKPR  300
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.13e-65MYB_related family protein