PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr11828.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 22107.5 Da PI: 4.4812 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.5e-19 | 77 | 127 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ +g r++lg++++a eAa+a+++a+ +++g Dr11828.1 77 RYRGVRQRP-WGKYAAEIRDPKRRG--CRVWLGTYDSAVEAARAYDKAAFEMRG 127 7********.**********96554..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MDSSLFFSLS TSPLPSPSQA LQASSMITSM ETQDISVSDY FSDNTEVEYI KSNTICNLIS 60 FSCEEEEEEE EKEKERRYRG VRQRPWGKYA AEIRDPKRRG CRVWLGTYDS AVEAARAYDK 120 AAFEMRGRKA ILNFPNEFGC SSEWVEVSPE PEKKRRKVEM EVVVKKEEVG XEWDSVWESL 180 GPLSPLSEIM AAI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 153 | 157 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61600.1 | 5e-34 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr11828.1 |