PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11820.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 552aa MW: 62816.5 Da PI: 7.0074

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	4.1e-09	392	429	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gLt +qV++WF N R + Dr11820.1 392 FEHflHPYPSDVDKHILARQTGLTRSQVSNWFINARVR 429 554459******************************88 PP
2	BELL	112.2	2.8e-36	256	324	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+k++Lls+leeVd+rY++y+eq+++v+ssFeavag g+a++Y +lA+ka+SrhFrcL+d i+ qi Dr11820.1 256 ELQKRKSRLLSMLEEVDRRYRKYCEQMRAVVSSFEAVAGDGAATVYSTLASKAMSRHFRCLRDGIVAQI 324 89*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MAQEARYYTE FTGENPASVT QGFDQGPELF NLQAGMEMLG IPSKNHRGGH QSQNPSLWRG 60 FNTDDDDDTT NGNNTHHNDI IVTHDGNPWQ QQQQQQHAGR LIVDDSSLRC LFPPSGVNSD 120 QHHHHHQQQQ QLAGLSLFPA DTLFAKSLTT NHHHHQQQQQ QQQQMVIQDG RFYTTYIPSP 180 SAPQSQSMQL RSSKYLTPAQ ELLNEFCNLG SSSSNNNNNN KIAKEKQQRS SQWEEGGTSS 240 SSNTFTQSLL SMDLLELQKR KSRLLSMLEE VDRRYRKYCE QMRAVVSSFE AVAGDGAATV 300 YSTLASKAMS RHFRCLRDGI VAQIKATRKA MGEKDPVAPG TTKGETPRLR LLDQCLRQQK 360 AFQQAGMMES HPWRPQRGLP ERSVSVLRAW LFEHFLHPYP SDVDKHILAR QTGLTRSQVS 420 NWFINARVRL WKPMVEEMYL EEVKEQENNS EDTANPNPNP NPNQLMHSDQ DQKPILNDSD 480 SLSSIINNSH QKNHHHQIQT TDNFGVVDLD FPSYNECSAA HQNFVEKTST IANQFNSQSW 540 MVIKLRTFLT GT

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MAQEARYYTE FTGENPASVT QGFDQGPELF NLQAGMEMLG IPSKNHRGGH QSQNPSLWRG  60
FNTDDDDDTT NGNNTHHNDI IVTHDGNPWQ QQQQQQHAGR LIVDDSSLRC LFPPSGVNSD  120
QHHHHHQQQQ QLAGLSLFPA DTLFAKSLTT NHHHHQQQQQ QQQQMVIQDG RFYTTYIPSP  180
SAPQSQSMQL RSSKYLTPAQ ELLNEFCNLG SSSSNNNNNN KIAKEKQQRS SQWEEGGTSS  240
SSNTFTQSLL SMDLLELQKR KSRLLSMLEE VDRRYRKYCE QMRAVVSSFE AVAGDGAATV  300
YSTLASKAMS RHFRCLRDGI VAQIKATRKA MGEKDPVAPG TTKGETPRLR LLDQCLRQQK  360
AFQQAGMMES HPWRPQRGLP ERSVSVLRAW LFEHFLHPYP SDVDKHILAR QTGLTRSQVS  420
NWFINARVRL WKPMVEEMYL EEVKEQENNS EDTANPNPNP NPNQLMHSDQ DQKPILNDSD  480
SLSSIINNSH QKNHHHQIQT TDNFGVVDLD FPSYNECSAA HQNFVEKTST IANQFNSQSW  540
MVIKLRTFLT GT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	3e-91	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr11820.1