PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr11500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | FAR1 | ||||||||
Protein Properties | Length: 529aa MW: 60246 Da PI: 9.2101 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 78.3 | 1.4e-24 | 257 | 347 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY eYA ++GF+ r k ++s r++++++++++C keg++ +++++ ++kerr+r++ r gCka+++++++++gkw+v+k+ eH+H+++ Dr11500.1 257 FYYEYAVRTGFRARAGKCRTSLRDDSVIMKQYTCVKEGFSVKKQRHgdDHKERRNRKSMREGCKAMIQLSRRDHGKWVVSKFIPEHSHPFV 347 9**************************************999988887999*************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
METKHSSPVN VEIDAVIQAL VVCKHNVWKP SRILCDCPGV AHLTSNLHSC VIWRSNSLVT 60 TLKNSLNELA GIKITSISRD ENNIVDELAA HARPNPPLSL FYWAMDRTHW LEEACSSRHL 120 YFKRPSAEKL PRHKRSVLTG ATLPQFRPIR FHSAAEEKNY APPQNHLFRG LMDTDAKVSM 180 GFYSESLELS NNDSHVPYQH NQQEQPLSDC INNTMVGFSA GMEFNGDEEL RGIRRNSTEF 240 EPLVGMEFDS LEAGKLFYYE YAVRTGFRAR AGKCRTSLRD DSVIMKQYTC VKEGFSVKKQ 300 RHGDDHKERR NRKSMREGCK AMIQLSRRDH GKWVVSKFIP EHSHPFVDDV KVEKVKKRRQ 360 EEFIQSFAYL SDKIEDGTIC TYRVSLKGGS IQKSFFVSFD VPNMHAACTC GMFTFSGILC 420 RHALRVFSIL GFCKLPDYYF LKRWKQIAKN GAISYKPPEL LHTDKISVAS RYNSLFLDVL 480 KFAEEGSTSA IIYKVAKDAL HKAFTEVAAA RKAVCSTEKG IPSSLFRLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27110.2 | 2e-25 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr11500.1 |