PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr11499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | DBB | ||||||||
Protein Properties | Length: 203aa MW: 22004.2 Da PI: 6.7375 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 21.7 | 4.3e-07 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e++ C ++ lC C ++ H H++vpl Dr11499.1 4 QCDVCERAEATVLCCADEAALCWGCDEKVHAAnklagkHQRVPL 47 7*****************************66899999999986 PP | |||||||
2 | zf-B_box | 31.9 | 2.8e-10 | 61 | 103 | 2 | 38 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +++C+ ++ek +fC +++ llC+ C +++H+ H+ Dr11499.1 61 PNPTCDICQEKTGYFFCLEDRALLCRHCDVSIHSAspfvssHQ 103 689******************************6566666676 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MKIQCDVCER AEATVLCCAD EAALCWGCDE KVHAANKLAG KHQRVPLLSC SSSNPSSNSS 60 PNPTCDICQE KTGYFFCLED RALLCRHCDV SIHSASPFVS SHQRFLITGV RVALQHYLTN 120 NSSNISSSSN NVSSNSSSXN GNNIRSNSLA SNSSPANKKL KMSLMNLAGD EVDGRRSQWP 180 WSEILETTGM DQCYGFPEPG ASN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 3e-53 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr11499.1 |