PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11398.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family FAR1
Protein Properties Length: 776aa    MW: 85856.4 Da    PI: 6.9187
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11398.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.32.7e-091501825890
       FAR1  58 trtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +  Cka+++v ++++gkw+v+kl leHnH+++
  Dr11398.1 150 LQDRCKAMMEVVRKEHGKWVVSKLILEHNHPVT 182
                5668**************************986 PP

2FAR178.31.5e-24467553190
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                +fY +YA +vGFsvrk    ks rn  + +r +vCs+eg+r ++  +  + +++r+etrtgC+a+++++ +  gk+evt++  +HnHela
  Dr11398.1 467 EFYIRYAGNVGFSVRKGWWDKSARNV-TRSRVYVCSREGFRPKNAVN--DGKKPRPETRTGCQARMTIRITPIGKYEVTEFIPDHNHELA 553
                6*********************7766.99**************9988..99*************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 776 aa     Download sequence    
MVLISEIIDG AVNEEEKKLG GEIVLTTSSD DIEKSLCNLK EFTNCSAEDK HSTIEKPSEV  60
NESPVENLTS ALLPESSAVD AAAAGKECYN EDALRIADIM RSYLHMQQTA AVGTDTSTST  120
GTVTGYDPTS IYPITATILP QQSSSEELPL QDRCKAMMEV VRKEHGKWVV SKLILEHNHP  180
VTPPQQPCCD VLQLPVMGME FESVEAAKTF YYTFSEQNGY KPRTGSNRRS SSSGALIMQR  240
FLCWRGNYLM YRKPSDTNTK KRKRGPYKSR GGKPYEEVEM KGGDIVDLIE VDSSSEKTAV  300
AGEDHGTVEV GSSPPIKEAA PLEMDAVQIG SPPIIGTMLW GADDGKGKST EKASQVASTT  360
TSKLLRELGV RVYRYTNEER RDIILKYMMK RNNRQVSEKP AKLSSRQALA ESRQRGTGGK  420
FLSKHEMQTS SAQGETATAD SDTTVEAAHS GELKVGMVFK NEDKAYEFYI RYAGNVGFSV  480
RKGWWDKSAR NVTRSRVYVC SREGFRPKNA VNDGKKPRPE TRTGCQARMT IRITPIGKYE  540
VTEFIPDHNH ELAAPLDIQM LRIAARAAEN VEAYAFLENQ SDQLLEQVER ILQTRLLEKP  600
SPSNVSKGQT QTTVQMENDD SGEIPRLGGK KKKDGSTSKK NNQTRLEASK KLKGRKGQAD  660
DVEITVRDNE HPPPVGSENI PPQLRNAANQ FFVPNQFMQG TYVPSHQYGH GSMQGFHGTT  720
QFGQESSAAA LQQQPFHGQL NQNVVQGSPS PDVTSLQFVG VSTQMDPQSI PVWDFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.18e-17FAR1 family protein