PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr11398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | FAR1 | ||||||||
Protein Properties | Length: 776aa MW: 85856.4 Da PI: 6.9187 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29.3 | 2.7e-09 | 150 | 182 | 58 | 90 |
FAR1 58 trtgCkaklkvkkekdgkwevtkleleHnHela 90 + Cka+++v ++++gkw+v+kl leHnH+++ Dr11398.1 150 LQDRCKAMMEVVRKEHGKWVVSKLILEHNHPVT 182 5668**************************986 PP | |||||||
2 | FAR1 | 78.3 | 1.5e-24 | 467 | 553 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA +vGFsvrk ks rn + +r +vCs+eg+r ++ + + +++r+etrtgC+a+++++ + gk+evt++ +HnHela Dr11398.1 467 EFYIRYAGNVGFSVRKGWWDKSARNV-TRSRVYVCSREGFRPKNAVN--DGKKPRPETRTGCQARMTIRITPIGKYEVTEFIPDHNHELA 553 6*********************7766.99**************9988..99*************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 776 aa Download sequence |
MVLISEIIDG AVNEEEKKLG GEIVLTTSSD DIEKSLCNLK EFTNCSAEDK HSTIEKPSEV 60 NESPVENLTS ALLPESSAVD AAAAGKECYN EDALRIADIM RSYLHMQQTA AVGTDTSTST 120 GTVTGYDPTS IYPITATILP QQSSSEELPL QDRCKAMMEV VRKEHGKWVV SKLILEHNHP 180 VTPPQQPCCD VLQLPVMGME FESVEAAKTF YYTFSEQNGY KPRTGSNRRS SSSGALIMQR 240 FLCWRGNYLM YRKPSDTNTK KRKRGPYKSR GGKPYEEVEM KGGDIVDLIE VDSSSEKTAV 300 AGEDHGTVEV GSSPPIKEAA PLEMDAVQIG SPPIIGTMLW GADDGKGKST EKASQVASTT 360 TSKLLRELGV RVYRYTNEER RDIILKYMMK RNNRQVSEKP AKLSSRQALA ESRQRGTGGK 420 FLSKHEMQTS SAQGETATAD SDTTVEAAHS GELKVGMVFK NEDKAYEFYI RYAGNVGFSV 480 RKGWWDKSAR NVTRSRVYVC SREGFRPKNA VNDGKKPRPE TRTGCQARMT IRITPIGKYE 540 VTEFIPDHNH ELAAPLDIQM LRIAARAAEN VEAYAFLENQ SDQLLEQVER ILQTRLLEKP 600 SPSNVSKGQT QTTVQMENDD SGEIPRLGGK KKKDGSTSKK NNQTRLEASK KLKGRKGQAD 660 DVEITVRDNE HPPPVGSENI PPQLRNAANQ FFVPNQFMQG TYVPSHQYGH GSMQGFHGTT 720 QFGQESSAAA LQQQPFHGQL NQNVVQGSPS PDVTSLQFVG VSTQMDPQSI PVWDFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 8e-17 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr11398.1 |