PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr11397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | LBD | ||||||||
Protein Properties | Length: 176aa MW: 19013.7 Da PI: 7.8415 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 145.5 | 1.5e-45 | 14 | 113 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+Ca+dCv+apyfpa+qp+kfa vhk+FGasnv kll++lp ++r+da+sslvyeA+ar+rdPvyG+vg i++lqqq++ l+++la +++e Dr11397.1 14 PCAACKLLRRRCAEDCVFAPYFPADQPHKFASVHKVFGASNVNKLLQELPVHHRSDAVSSLVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAIAQAE 113 7**********************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MREVAGKRQG GGSPCAACKL LRRRCAEDCV FAPYFPADQP HKFASVHKVF GASNVNKLLQ 60 ELPVHHRSDA VSSLVYEANA RVRDPVYGCV GAISSLQQQV DALQTQLAIA QAEMLHIRMS 120 HTAYLARLGL TPAMSGSGGS SSGTSSPKLM EINEKPTYGL EMVVDQSTLD EPLWPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 6e-65 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr11397.1 |