PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10938.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 449aa MW: 49376.4 Da PI: 5.7634

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10938.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	110.8	6.6e-35	245	299	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+ Dr10938.1 245 KPRMRWTPELHECFVEAVNQLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 299 79****************************************************8 PP
2	Myb_DNA-binding	56.2	7.8e-18	247	298	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m g+t +++ks++qky+ Dr10938.1 247 RMRWTPELHECFVEAVNQLGGSekaTPKGVLKLMKvDGLTIYHVKSHLQKYR 298 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MEARSSLAMQ KSDIKQLCSS RVPSVMSSSL PVLPTLEERY PALPDSQQVS MERELRSEPV 60 TSCHTPFISN SGSMGPLFSS APGFSSDLHF SSVAPLDRQM ITTPLVSQSS KSGMWFPAQL 120 HSGASQTSMN NFTRESPDVS WPPVSLQGVI DNASAVTNQV QSNCIMVSDD KQDDLWSDLI 180 ADEWKELLND PNSTDTQPKE PYSLGQASSN ISAHKPQTHL AVPSHSGEHY AATSPTSGAN 240 NASAKPRMRW TPELHECFVE AVNQLGGSEK ATPKGVLKLM KVDGLTIYHV KSHLQKYRTA 300 RYRPDSSEGT LEKKASLIEG VSSLDLKTGI EITEALRLQM EVQKRLHEQL EIQRNLQLRI 360 EEQGRYLQMM FEQQCKTGMD KLKASPSQSS DPTGLAQTAE AAPSDSVSAK PTESLEQKKT 420 TENEPENIVI LDEAHPPPKR LKGAEHDLQ

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MEARSSLAMQ KSDIKQLCSS RVPSVMSSSL PVLPTLEERY PALPDSQQVS MERELRSEPV  60
TSCHTPFISN SGSMGPLFSS APGFSSDLHF SSVAPLDRQM ITTPLVSQSS KSGMWFPAQL  120
HSGASQTSMN NFTRESPDVS WPPVSLQGVI DNASAVTNQV QSNCIMVSDD KQDDLWSDLI  180
ADEWKELLND PNSTDTQPKE PYSLGQASSN ISAHKPQTHL AVPSHSGEHY AATSPTSGAN  240
NASAKPRMRW TPELHECFVE AVNQLGGSEK ATPKGVLKLM KVDGLTIYHV KSHLQKYRTA  300
RYRPDSSEGT LEKKASLIEG VSSLDLKTGI EITEALRLQM EVQKRLHEQL EIQRNLQLRI  360
EEQGRYLQMM FEQQCKTGMD KLKASPSQSS DPTGLAQTAE AAPSDSVSAK PTESLEQKKT  420
TENEPENIVI LDEAHPPPKR LKGAEHDLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-80	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr10938.1