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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr10811.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 334aa MW: 37733.1 Da PI: 8.0066 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 64.8 | 2.3e-20 | 69 | 141 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek 72
+fY +YA++vGFsvr+sks++s+++++i++r+fvCskeg++ ++ + + k++r+ra+ r gC+a+++v +++
Dr10811.1 69 SFYMAYASRVGFSVRISKSRRSRNDESIIMRRFVCSKEGFHMKKGNFdDGKKKRKRATIREGCNAMIEVIQKY 141
5***************************************99988765789999*************997765 PP
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| 2 | FAR1 | 56 | 1.3e-17 | 146 | 218 | 19 | 90 |
FAR1 19 skkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
s++s+r++++++r+fvC+keg++ e++ ++k++r+r+ tr gCka+++v k++ +kw+v+kl++eH+H+la
Dr10811.1 146 SRRSTRDDSFVMRRFVCTKEGFTPFEESYdENKKKRSRTPTREGCKAMFEVIKKDYDKWVVSKLVTEHTHDLA 218
67889999**************98666654788999**********************************996 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MESSSSEDEG STRDNNVDLN DDNMEQHMGL EVSSHLAEEG GLFVPHXQNA ENPEPFVGME 60 FESEESAKSF YMAYASRVGF SVRISKSRRS RNDESIIMRR FVCSKEGFHM KKGNFDDGKK 120 KRKRATIREG CNAMIEVIQK YYGRLSRRST RDDSFVMRRF VCTKEGFTPF EESYDENKKK 180 RSRTPTREGC KAMFEVIKKD YDKWVVSKLV TEHTHDLAVA PSKVHYIQSQ SEVVVLAKSG 240 TVNRDKSATP ANLKPQLVEP VTGFTMSTSL PTEXGGGLVE MDEVIKGATS DAISGHETLI 300 RAPTKGNAPP LFVQIEIKFS LKMKHININN WPES |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 178 | 203 | KKKRSRTPTREGCKAMFEVIKKDYDK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G59470.2 | 1e-21 | FAR1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr10811.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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