PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10692.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 551aa    MW: 61422.9 Da    PI: 6.1255
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10692.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.52.6e-1381815511374
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                l++ L++cA+a++++d+  a++l+++l+ ++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   sse l+++++++ev+P++kf+++ aN 
  Dr10692.1 181 LRQGLIACARALAENDMPVADWLMTELRPMVSVSGEPLQRLGAYLLEGLVARLASSGSSIYKALKCKEPA---SSELLSYMHILYEVCPFFKFGYMSANG 277
                5788*****************************************************************9...9************************** PP

       GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                aI eav+geervHiiDf+i +G QW++L+qaLa+Rp+gpp lRiTgv++p s   +   l+ +g+rL+++Ae+++vpfefn+ +a +  ++el++L++++
  Dr10692.1 278 AIAEAVKGEERVHIIDFQIAMGSQWVTLIQALAARPGGPPCLRITGVDDPVSAyaRGGGLHLVGKRLSRLAESCNVPFEFNA-AAISGCEVELNNLEIRS 376
                **************************************************99999999************************.888999*********** PP

       GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                gEalaVn+ +qlh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rf+e+l+yy+a+f+s+++ lpre++eri vE+++l+r+ivn++
  Dr10692.1 377 GEALAVNFPFQLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFVETLDYYTAIFESIDVALPRENNERIQVEQHCLARDIVNII 476
                **************************************************************************************************** PP

       GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                acegaer+erhe l+kW++r+++aGF+p+pls  +++++k+ll+++ ++ yr+ee +g+l+lgWk+r+Lv+ +aWr
  Dr10692.1 477 ACEGAERVERHELLGKWKSRFTMAGFTPYPLSPLVNATIKALLENYCEN-YRLEEVDGCLYLGWKNRALVVSCAWR 551
                **********************************************955.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MIASHIKHSA GYKSMQASDK HKNLKKPQQS YYQQNSMSLR EVHSQLLPPN YQSLRNSYSG  60
DCSQLKSTVP QTSHEQYCTL ESFTSAGYTV HTSPSTLSYS PSTESPVSQQ DCLSDNYGSP  120
ISVSCITEDP IDLKHKLRQL ENVMLGPGSD IIDSFEGTFN SQLILEPEKW KQILEIPRGD  180
LRQGLIACAR ALAENDMPVA DWLMTELRPM VSVSGEPLQR LGAYLLEGLV ARLASSGSSI  240
YKALKCKEPA SSELLSYMHI LYEVCPFFKF GYMSANGAIA EAVKGEERVH IIDFQIAMGS  300
QWVTLIQALA ARPGGPPCLR ITGVDDPVSA YARGGGLHLV GKRLSRLAES CNVPFEFNAA  360
AISGCEVELN NLEIRSGEAL AVNFPFQLHH MPDESVSTEN HRDRLLRLVK SLSPKVVTLV  420
EQESNTNTAP FFPRFVETLD YYTAIFESID VALPRENNER IQVEQHCLAR DIVNIIACEG  480
AERVERHELL GKWKSRFTMA GFTPYPLSPL VNATIKALLE NYCENYRLEE VDGCLYLGWK  540
NRALVVSCAW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein