PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10609.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 460aa    MW: 51072.9 Da    PI: 5.1684
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10609.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS296.75.9e-91674572373
       GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalkl..fsevsPilkfsh 95 
                ++lL++cA+a++++d +laq++L+ l+++a pdgd++qRl++ f++AL  r +++++  ++ l++  t+ ++     s++++a +l  f +++P+++f++
  Dr10609.1  67 EQLLVHCATAIETNDSTLAQQILWVLNNIAPPDGDSNQRLTSAFLRALIIRASKTGT--CAVLAAAVTRADSelalYSHRFSAIELasFIDLTPWYRFGF 164
                79***************************************************9433..33332222222222357777788888789************ PP

       GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiT..gvgspesg.....skeeleetgerLakfAeelgvpfefnvl...vakr 185
                 ++N+aI ea+eg + +H +D++ ++++Q p+L++ La+Rpegpp +R+T  g+  ++++        ++ e+g rL  fA++ ++ +ef+v+    ++ 
  Dr10609.1 165 SATNSAITEAIEGFQIIHLVDLSTTHCMQIPTLIDMLANRPEGPPFIRLTvpGITYSNTNpppplLDLSYDELGARLIAFARSRNIGMEFRVIpsdFSQG 264
                **************************************************44455545448898888999**********************97765666 PP

       GRAS 186 ledleleeLrvkp....gEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                +++l +e+Lr ++    gEal+Vn++++lh++++e+vs e      r+  Lk+++sl+P+++++ve++ad ++++++ r+ +a+++ +  +d++e+ lp+
  Dr10609.1 265 FDTL-IEQLRAEQmvcdGEALVVNCQMMLHYVPEETVSHEIxhlsMRSCCLKAIRSLEPTIITLVEEDADFTDSDLVGRLRSAFNFLWIPYDAVETFLPK 363
                7777.999999989999********************999877778999*************************************************** PP

       GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 s++r+++E   + ++i+n +a+eg +r+er e+ ++W +r++ aGF+ + ++e+a+ ++k++l +++  g+ +++e++ lvl Wk++++v+++aW
  Dr10609.1 364 GSDQRRWYEGG-VCWKIENXIAHEGMQRVERLESRGRWVQRMRGAGFRGLGFGEEAVGEVKAMLDEHA-AGWGLKKEDEGLVLSWKGHNVVFATAW 457
                ***********.99******************************************************.99************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MMQFSESAPP PPPPPPPPPL PPLQLHQNPL GLCLDLTTTK SHSRPWPSFP TSSKTLGTTF  60
NNASCMEQLL VHCATAIETN DSTLAQQILW VLNNIAPPDG DSNQRLTSAF LRALIIRASK  120
TGTCAVLAAA VTRADSELAL YSHRFSAIEL ASFIDLTPWY RFGFSATNSA ITEAIEGFQI  180
IHLVDLSTTH CMQIPTLIDM LANRPEGPPF IRLTVPGITY SNTNPPPPLL DLSYDELGAR  240
LIAFARSRNI GMEFRVIPSD FSQGFDTLIE QLRAEQMVCD GEALVVNCQM MLHYVPEETV  300
SHEIXHLSMR SCCLKAIRSL EPTIITLVEE DADFTDSDLV GRLRSAFNFL WIPYDAVETF  360
LPKGSDQRRW YEGGVCWKIE NXIAHEGMQR VERLESRGRW VQRMRGAGFR GLGFGEEAVG  420
EVKAMLDEHA AGWGLKKEDE GLVLSWKGHN VVFATAWAPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-164GRAS family protein