PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10379.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 288aa MW: 32482.7 Da PI: 7.711

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10379.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	238	270	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+++++++L +++gL+ +q+ +WF N+R + Dr10379.1 238 WPYPTEDDKARLVQETGLQLKQINNWFINQRKR 270 69*****************************87 PP
2	ELK	28.2	4.3e-10	191	212	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Dr10379.1 191 ELKHELKHGYKEKIVDIREEIL 212 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MPRVLTYAGA TYRYKGPTAS SAKYKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDAQ 60 LAQSQHVVAK YSVLGGGAGS QMLGDDKELD QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM 120 ACWELEQSLQ SLTGVSPGEG TGATMSDDDD DQADSETNLF DGGLDGTDTM GFGPLVPTES 180 ERSLMERVRQ ELKHELKHGY KEKIVDIREE ILRKRRAGKL PGDTTSTLKS WWQSHSKWPY 240 PTEDDKARLV QETGLQLKQI NNWFINQRKR NWHSNPSSST VLKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	288	RKRNWHSNPSSSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-175	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr10379.1